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This orthogroup contains 227 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 227 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13844 | SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D | 185 / 227 | 81.5% | 98.4% of 188 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 187 / 227 | 82.4% | 100.0% of 187 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 185 / 227 | 81.5% | 98.9% of 187 | ≥80% support |
| GO | GO:0016514 Cellular Component | SWI/SNF complex | 185 / 227 | 81.5% | 98.9% of 187 | ≥80% support |
| Pfam | PF02201 | SWIB | 178 / 227 | 78.4% | 99.4% of 179 | ≥50% support |
| GO | GO:0003712 Molecular Function | transcription coregulator activity | 181 / 227 | 79.7% | 96.8% of 187 | ≥50% support |
| KEGG | K11650 | SMARCD — Chromosome and associated proteins | 169 / 227 | 74.5% | 98.8% of 171 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000016954.1 | XP_020609203.1 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like [Orbicella faveolata] | Q96GM5 SWI/SNF-related matrix-associated actin-dependent regulator | JBrowse |
| Montipora cactus | BRAKERNUSP00000022600.1 | XP_044178824.1 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like [Acropora millepora] | Q96GM5 SWI/SNF-related matrix-associated actin-dependent regulator | JBrowse |
| Montipora cactus | g33811.t1.1 | none | – | JBrowse | |
| Montipora cactus | g41144.t1.1 | none | – | JBrowse |
