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This orthogroup contains 224 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 224 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12686 | 3'-5' EXORIBONUCLEASE CSL4-RELATED | 204 / 224 | 91.1% | 100.0% of 204 | ≥80% support |
| Pfam | PF14382 | ECR1_N — Exosome complex exonuclease RRP4 N-terminal region | 188 / 224 | 83.9% | 92.6% of 203 | ≥80% support |
| Pfam | PF10447 | EXOSC1 | 182 / 224 | 81.3% | 89.7% of 203 | ≥80% support |
| GO | GO:0000178 Cellular Component | exosome (RNase complex) | 204 / 224 | 91.1% | 100.0% of 204 | ≥80% support |
| GO | GO:0006396 Biological Process | RNA processing | 204 / 224 | 91.1% | 100.0% of 204 | ≥80% support |
| GO | GO:0000176 Cellular Component | nuclear exosome (RNase complex) | 203 / 224 | 90.6% | 99.5% of 204 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 203 / 224 | 90.6% | 99.5% of 204 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 182 / 224 | 81.3% | 89.2% of 204 | ≥80% support |
| KEGG | K07573 | CSL4, EXOSC1 — Messenger RNA biogenesis | 182 / 224 | 81.3% | 100.0% of 182 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000047413.1 | XP_029201212.2 | exosome complex component CSL4-like [Acropora millepora] | Q9DAA6 Exosome complex component CSL4 OS=Mus musculus OX=10090 GN=E | JBrowse |
| Montipora cactus | g39973.t1.1 | none | – | JBrowse |
