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This orthogroup contains 213 genes from 111 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 213 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46858 | OS05G0521000 PROTEIN | 190 / 213 | 89.2% | 100.0% of 190 | ≥80% support |
| Pfam | PF13920 | zf-C3HC4_3 — Zinc finger, C3HC4 type (RING finger) | 187 / 213 | 87.8% | 97.4% of 192 | ≥80% support |
| GO | GO:0007049 Biological Process | cell cycle | 190 / 213 | 89.2% | 99.0% of 192 | ≥80% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 190 / 213 | 89.2% | 99.0% of 192 | ≥80% support |
| GO | GO:0061630 Molecular Function | ubiquitin protein ligase activity | 190 / 213 | 89.2% | 99.0% of 192 | ≥80% support |
| GO | GO:0043066 Biological Process | negative regulation of apoptotic process | 169 / 213 | 79.3% | 88.0% of 192 | ≥50% support |
| GO | GO:0010468 Biological Process | regulation of gene expression | 167 / 213 | 78.4% | 87.0% of 192 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000007350.1 | XP_029209148.1 | protein Mdm4-like isoform X4 [Acropora millepora] | Q5XIN1 Protein Mdm4 OS=Rattus norvegicus OX=10116 GN=Mdm4 PE=1 SV=1 | JBrowse |
| Montipora cactus | BRAKERNUSP00000019072.1 | KAJ7385510.1 | E3 ubiquitin-protein ligase Mdm2 [Desmophyllum pertusum] | – | JBrowse |
| Montipora cactus | g11584.t1.1 | none | – | JBrowse | |
| Montipora cactus | g47411.t1.1 | none | – | JBrowse |
