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This orthogroup contains 205 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 205 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR20208 | STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1 | 179 / 205 | 87.3% | 100.0% of 179 | ≥80% support |
| Pfam | PF21202 | SLX1_C — Structure-specific endonuclease subunit SLX1, C-terminal | 176 / 205 | 85.9% | 97.2% of 181 | ≥80% support |
| GO | GO:0000724 Biological Process | double-strand break repair via homologous recombination | 179 / 205 | 87.3% | 100.0% of 179 | ≥80% support |
| GO | GO:0008821 Molecular Function | crossover junction DNA endonuclease activity | 179 / 205 | 87.3% | 100.0% of 179 | ≥80% support |
| GO | GO:0017108 Molecular Function | 5'-flap endonuclease activity | 179 / 205 | 87.3% | 100.0% of 179 | ≥80% support |
| GO | GO:0033557 Cellular Component | Slx1-Slx4 complex | 179 / 205 | 87.3% | 100.0% of 179 | ≥80% support |
| Pfam | PF01541 | GIY-YIG | 159 / 205 | 77.6% | 87.9% of 181 | ≥50% support |
| GO | GO:0006281 Biological Process | DNA repair | 156 / 205 | 76.1% | 87.2% of 179 | ≥50% support |
| KEGG | K15078 | SLX1 — DNA repair and recombination proteins | 163 / 205 | 79.5% | 99.4% of 164 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000028582.1 | XP_044173747.1 | structure-specific endonuclease subunit SLX1 homolog [Acropora millepora] | A7STV9 Structure-specific endonuclease subunit SLX1 homolog OS=Nema | JBrowse |
| Montipora cactus | g4956.t1.1 | none | – | JBrowse |
