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This orthogroup contains 196 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 196 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR48019 | SERUM RESPONSE FACTOR HOMOLOG | 149 / 196 | 76.0% | 99.3% of 150 | ≥50% support |
| Pfam | PF00319 | SRF-TF — SRF-type transcription factor (DNA-binding and dimerisation domain) | 153 / 196 | 78.1% | 100.0% of 153 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 156 / 196 | 79.6% | 100.0% of 156 | ≥50% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 156 / 196 | 79.6% | 100.0% of 156 | ≥50% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 150 / 196 | 76.5% | 96.2% of 156 | ≥50% support |
| GO | GO:0045944 Biological Process | positive regulation of transcription by RNA polymerase II | 150 / 196 | 76.5% | 96.2% of 156 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 149 / 196 | 76.0% | 95.5% of 156 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 149 / 196 | 76.0% | 95.5% of 156 | ≥50% support |
| GO | GO:0000987 Molecular Function | cis-regulatory region sequence-specific DNA binding | 148 / 196 | 75.5% | 94.9% of 156 | ≥50% support |
| KEGG | K04378 | SRF — Transcription factors | 143 / 196 | 73.0% | 99.3% of 144 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000055003.1 | XP_044163497.1 | serum response factor-like isoform X2 [Acropora millepora] | P23790 Serum response factor OS=Xenopus laevis OX=8355 GN=srf PE=2 | JBrowse |
| Montipora cactus | g50703.t1.1 | none | – | JBrowse |
