← Back to the gene family browser
This orthogroup contains 186 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 186 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR20648 | ELONGIN-C | 167 / 186 | 89.8% | 100.0% of 167 | ≥80% support |
| Pfam | PF03931 | Skp1_POZ — Skp1 family, tetramerisation domain | 163 / 186 | 87.6% | 100.0% of 163 | ≥80% support |
| GO | GO:0006511 Biological Process | ubiquitin-dependent protein catabolic process | 167 / 186 | 89.8% | 100.0% of 167 | ≥80% support |
| GO | GO:0030674 Molecular Function | protein-macromolecule adaptor activity | 167 / 186 | 89.8% | 100.0% of 167 | ≥80% support |
| GO | GO:0070449 Cellular Component | elongin complex | 167 / 186 | 89.8% | 100.0% of 167 | ≥80% support |
| KEGG | K03872 | ELOC, TCEB1 — DNA repair and recombination proteins | 154 / 186 | 82.8% | 100.0% of 154 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000000621.1 | KAJ7326575.1 | Transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) [Desmophyllum pertusum] | Q2KII4 Elongin-C OS=Bos taurus OX=9913 GN=ELOC PE=1 SV=1 | JBrowse |
| Montipora cactus | BRAKERNUSP00000039781.1 | KAJ7326575.1 | Transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) [Desmophyllum pertusum] | Q2KII4 Elongin-C OS=Bos taurus OX=9913 GN=ELOC PE=1 SV=1 | JBrowse |
| Montipora cactus | g42208.t1.1 | none | – | JBrowse | |
| Montipora cactus | g42317.t1.1 | none | – | JBrowse |
