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This orthogroup contains 182 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 182 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR18847 | 20 KD NUCLEAR CAP BINDING PROTEIN | 160 / 182 | 87.9% | 100.0% of 160 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 159 / 182 | 87.4% | 100.0% of 159 | ≥80% support |
| GO | GO:0000339 Molecular Function | RNA cap binding | 160 / 182 | 87.9% | 100.0% of 160 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 160 / 182 | 87.9% | 100.0% of 160 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 160 / 182 | 87.9% | 100.0% of 160 | ≥80% support |
| GO | GO:0005846 Cellular Component | nuclear cap binding complex | 160 / 182 | 87.9% | 100.0% of 160 | ≥80% support |
| GO | GO:0045292 Biological Process | mRNA cis splicing, via spliceosome | 160 / 182 | 87.9% | 100.0% of 160 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 159 / 182 | 87.4% | 99.4% of 160 | ≥80% support |
| KEGG | K12883 | NCBP2, CBP20 — Spliceosome | 160 / 182 | 87.9% | 100.0% of 160 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000007753.1 | CAH3172226.1 | unnamed protein product [Porites lobata] | A2SW84 Nuclear cap-binding protein subunit 2 OS=Siniperca chuatsi O | JBrowse |
| Montipora cactus | g32948.t1.1 | none | – | JBrowse |
