← Back to the gene family browser
This orthogroup contains 169 genes from 81 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 169 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10270 | SOX TRANSCRIPTION FACTOR | 96 / 169 | 56.8% | 72.7% of 132 | ≥50% support |
| Pfam | PF00505 | HMG_box — HMG (high mobility group) box | 132 / 169 | 78.1% | 95.7% of 138 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000014611.1 | XP_029212905.2 | uncharacterized protein LOC114976601 [Acropora millepora] | Q2KJ34 HMG box-containing protein 1 OS=Bos taurus OX=9913 GN=HBP1 P | JBrowse |
| Montipora cactus | BRAKERNUSP00000014612.1 | XP_029212905.2 | uncharacterized protein LOC114976601 [Acropora millepora] | – | JBrowse |
| Montipora cactus | BRAKERNUSP00000037146.1 | XP_029212905.2 | uncharacterized protein LOC114976601 [Acropora millepora] | B3DM43 Transcription factor Sox-5 OS=Xenopus tropicalis OX=8364 GN= | JBrowse |
| Montipora cactus | BRAKERNUSP00000037171.1 | XP_029212905.2 | uncharacterized protein LOC114976601 [Acropora millepora] | Q2KJ34 HMG box-containing protein 1 OS=Bos taurus OX=9913 GN=HBP1 P | JBrowse |
| Montipora cactus | g15321.t1.1 | none | – | JBrowse | |
| Montipora cactus | g15322.t1.1 | none | – | JBrowse | |
| Montipora cactus | g29845.t1.1 | none | – | JBrowse | |
| Montipora cactus | g29846.t1.1 | none | – | JBrowse |
