← Back to the gene family browser
This orthogroup contains 139 genes from 103 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 139 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0005515 Molecular Function | protein binding | 117 / 139 | 84.2% | 95.9% of 122 | ≥80% support |
| PANTHER | PTHR13318 | UNCHARACTERIZED | 78 / 139 | 56.1% | 63.9% of 122 | ≥50% support |
| Pfam | PF12937 | F-box-like | 102 / 139 | 73.4% | 87.2% of 117 | ≥50% support |
| Pfam | PF13516 | LRR_6 — Leucine Rich repeat | 91 / 139 | 65.5% | 77.8% of 117 | ≥50% support |
| GO | GO:0019005 Cellular Component | SCF ubiquitin ligase complex | 84 / 139 | 60.4% | 68.9% of 122 | ≥50% support |
| GO | GO:0031146 Biological Process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 84 / 139 | 60.4% | 68.9% of 122 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora cactus | BRAKERNUSP00000049249.1 | XP_029194630.2 | F-box/LRR-repeat protein 20-like [Acropora millepora] | – | JBrowse |
| Montipora cactus | g36094.t1.1 | none | – | JBrowse |
