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Support counts the member genes carrying the term. % of genes is that count over all 2,856 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00104 | Hormone_recep — Ligand-binding domain of nuclear hormone receptor | 2479 / 2,856 | 86.8% | 96.0% of 2,583 | ≥80% support |
| Pfam | PF00105 | zf-C4 — Zinc finger, C4 type (two domains) | 2307 / 2,856 | 80.8% | 89.3% of 2,583 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 2355 / 2,856 | 82.5% | 91.5% of 2,574 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 2330 / 2,856 | 81.6% | 90.5% of 2,574 | ≥80% support |
| GO | GO:0004879 Molecular Function | nuclear receptor activity | 2321 / 2,856 | 81.3% | 90.2% of 2,574 | ≥80% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 2307 / 2,856 | 80.8% | 89.6% of 2,574 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 2307 / 2,856 | 80.8% | 89.6% of 2,574 | ≥80% support |
| GO | GO:0043565 Molecular Function | sequence-specific DNA binding | 2307 / 2,856 | 80.8% | 89.6% of 2,574 | ≥80% support |
| PANTHER | PTHR24083 | NUCLEAR HORMONE RECEPTOR | 1684 / 2,856 | 59.0% | 65.4% of 2,575 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 1971 / 2,856 | 69.0% | 76.6% of 2,574 | ≥50% support |
| GO | GO:0030154 Biological Process | cell differentiation | 1694 / 2,856 | 59.3% | 65.8% of 2,574 | ≥50% support |
| GO | GO:0048856 Biological Process | anatomical structure development | 1684 / 2,856 | 59.0% | 65.4% of 2,574 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora capitata | g11629.t1 | XP_029212300.2 | retinoic acid receptor RXR-like [Acropora millepora] | Q90416 Retinoic acid receptor RXR-gamma-A OS=Danio rerio OX=7955 GN | JBrowse |
| Montipora capitata | g12886.t1 | XP_029186447.1 | nuclear receptor subfamily 2 group F member 1-A-like [Acropora millepora] | Q06725 Nuclear receptor subfamily 2 group F member 1-A OS=Danio rer | JBrowse |
| Montipora capitata | g1533.t1 | XP_044163987.1 | nuclear receptor subfamily 2 group E member 1-like [Acropora millepora] | Q9TTF0 Photoreceptor-specific nuclear receptor OS=Bos taurus OX=991 | JBrowse |
| Montipora capitata | g19052.t1 | XP_029208455.1 | orphan steroid hormone receptor 2 isoform X2 [Acropora millepora] | P49116 Nuclear receptor subfamily 2 group C member 2 OS=Homo sapien | JBrowse |
| Montipora capitata | g2512.t1 | XP_029211621.2 | nuclear receptor subfamily 2 group E member 1-like [Acropora millepora] | Q9TTF0 Photoreceptor-specific nuclear receptor OS=Bos taurus OX=991 | JBrowse |
| Montipora capitata | g28603.t1 | XP_029191520.2 | nuclear receptor subfamily 2 group F member 5 [Acropora millepora] | Q60632 COUP transcription factor 1 OS=Mus musculus OX=10090 GN=Nr2f | JBrowse |
| Montipora capitata | g29627.t1 | XP_029203020.2 | retinoic acid receptor RXR-alpha-like [Acropora millepora] | P51128 Retinoic acid receptor RXR-alpha OS=Xenopus laevis OX=8355 G | JBrowse |
| Montipora capitata | g34855.t1 | XP_015760138.1 | PREDICTED: steroid hormone receptor ERR2-like isoform X2 [Acropora digitifera] | Q5RAM2 Estrogen-related receptor gamma OS=Pongo abelii OX=9601 GN=E | JBrowse |
| Montipora capitata | g472.t1 | XP_015763932.1 | PREDICTED: nuclear receptor subfamily 2 group F member 1-B-like [Acropora digitifera] | Q6PH18 Nuclear receptor subfamily 2 group F member 1-B OS=Danio rer | JBrowse |
| Montipora capitata | g493.t1 | XP_015763962.1 | PREDICTED: COUP transcription factor 2-like isoform X2 [Acropora digitifera] | Q60632 COUP transcription factor 1 OS=Mus musculus OX=10090 GN=Nr2f | JBrowse |
| Montipora capitata | g6120.t1 | XP_015751727.1 | PREDICTED: hepatocyte nuclear factor 4-gamma-like isoform X1 [Acropora digitifera] | Q14541 Hepatocyte nuclear factor 4-gamma OS=Homo sapiens OX=9606 GN | JBrowse |
| Montipora capitata | g6487.t1 | XP_015763888.1 | PREDICTED: orphan steroid hormone receptor 2-like [Acropora digitifera] | Q90733 COUP transcription factor 2 OS=Gallus gallus OX=9031 GN=NR2F | JBrowse |
| Montipora capitata | g6590.t1 | PFX22931.1 | Photoreceptor-specific nuclear receptor [Stylophora pistillata] | Q9TTF0 Photoreceptor-specific nuclear receptor OS=Bos taurus OX=991 | JBrowse |
| Montipora capitata | g6592.t1 | KAJ7363469.1 | positive regulation of rhodopsin protein expression [Desmophyllum pertusum] | Q9TTF0 Photoreceptor-specific nuclear receptor OS=Bos taurus OX=991 | JBrowse |
| Montipora capitata | g7185.t1 | XP_044184860.1 | retinoic acid receptor RXR-alpha-B isoform X2 [Acropora millepora] | Q90415 Retinoic acid receptor RXR-alpha-B OS=Danio rerio OX=7955 GN | JBrowse |
