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This orthogroup contains 194 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 194 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13946 | DNA-DIRECTED RNA POLYMERASE I,II,III | 173 / 194 | 89.2% | 100.0% of 173 | ≥80% support |
| Pfam | PF13656 | RNA_pol_L_2 — RNA polymerase Rpb3/Rpb11 dimerisation domain | 173 / 194 | 89.2% | 100.0% of 173 | ≥80% support |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 173 / 194 | 89.2% | 100.0% of 173 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 173 / 194 | 89.2% | 100.0% of 173 | ≥80% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 173 / 194 | 89.2% | 100.0% of 173 | ≥80% support |
| GO | GO:0001055 Molecular Function | RNA polymerase II activity | 172 / 194 | 88.7% | 99.4% of 173 | ≥80% support |
| GO | GO:0005665 Cellular Component | RNA polymerase II, core complex | 172 / 194 | 88.7% | 99.4% of 173 | ≥80% support |
| GO | GO:0006366 Biological Process | transcription by RNA polymerase II | 171 / 194 | 88.1% | 98.8% of 173 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 161 / 194 | 83.0% | 93.1% of 173 | ≥80% support |
| KEGG | K03008 | RPB11, POLR2J — DNA repair and recombination proteins | 169 / 194 | 87.1% | 99.4% of 170 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora capitata | g424.t1 | XP_020615146.1 | DNA-directed RNA polymerase II subunit RPB11-a-like [Orbicella faveolata] | Q32P79 DNA-directed RNA polymerase II subunit RPB11 OS=Bos taurus O | JBrowse |
