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Support counts the member genes carrying the term. % of genes is that count over all 6,131 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 5534 / 6,131 | 90.3% | 100.0% of 5,537 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 5541 / 6,131 | 90.4% | 99.9% of 5,546 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 5489 / 6,131 | 89.5% | 99.0% of 5,546 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 5411 / 6,131 | 88.3% | 97.6% of 5,546 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 4181 / 6,131 | 68.2% | 75.4% of 5,546 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 4143 / 6,131 | 67.6% | 74.7% of 5,546 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 3711 / 6,131 | 60.5% | 66.9% of 5,546 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Morbakka virulenta | scaffold149.g55.t1 | CAI9733129.1 | serine serine/threonine-protein kinase dyrk1 [Octopus vulgaris] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Morbakka virulenta | scaffold189.g37.t1 | CAR62457.1 | putative Pdx/Xlox homeodomain transcription factor, partial [Turritopsis dohrnii] | P17138 Homeobox protein HTR-A2 (Fragment) OS=Helobdella triserialis | JBrowse |
| Morbakka virulenta | scaffold21.g122.t1 | CAG4978653.1 | unnamed protein product [Colias eurytheme] | Q75W95 NK1 transcription factor-related protein 1 OS=Danio rerio OX | JBrowse |
| Morbakka virulenta | scaffold216.g16.t1 | XP_012566941.2 | homeobox protein mab-5-like [Hydra vulgaris] | P31262 Homeobox protein Hox-C5 (Fragment) OS=Notophthalmus viridesc | JBrowse |
| Morbakka virulenta | scaffold27.g7.t1 | CAA57211.1 | hox1 [Podocoryna carnea] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Morbakka virulenta | scaffold321.g5.t1 | AAB48009.1 | Cnox4 homeodomain protein [Eleutheria dichotoma] | P09070 Homeobox protein Hox-B4 OS=Xenopus laevis OX=8355 GN=hoxb4 P | JBrowse |
| Morbakka virulenta | scaffold321.g5.t2 | AAB48009.1 | Cnox4 homeodomain protein [Eleutheria dichotoma] | P09070 Homeobox protein Hox-B4 OS=Xenopus laevis OX=8355 GN=hoxb4 P | JBrowse |
| Morbakka virulenta | scaffold321.g6.t1 | ACM62725.1 | Cdx caudal homeodomain protein [Clytia hemisphaerica] | P24061 Homeobox protein Hox-A7 OS=Coturnix japonica OX=93934 GN=HOX | JBrowse |
| Morbakka virulenta | scaffold340.g1.t1 | AAD32577.1 | Scox-3 homeodomain protein, partial [Cassiopea xamachana] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Morbakka virulenta | scaffold348.g20.t1 | AAD32576.1 | Scox-2 homeodomain protein, partial [Cassiopea xamachana] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Morbakka virulenta | scaffold35.g23.t1 | XP_046562695.1 | barH-like 1 homeobox protein [Haliotis rubra] | Q22910 Homeobox protein ceh-31 OS=Caenorhabditis elegans OX=6239 GN | JBrowse |
| Morbakka virulenta | scaffold35.g78.t1 | none | – | JBrowse | |
| Morbakka virulenta | scaffold42.g46.t1 | KAJ8379970.1 | hypothetical protein SKAU_G00007480 [Synaphobranchus kaupii] | A5YC49 Homeobox protein Nkx-6.3 OS=Xenopus laevis OX=8355 GN=nkx6-3 | JBrowse |
| Morbakka virulenta | scaffold42.g46.t2 | NWI99408.1 | NKX63 protein [Crypturellus undulatus] | A6NJ46 Homeobox protein Nkx-6.3 OS=Homo sapiens OX=9606 GN=NKX6-3 P | JBrowse |
| Morbakka virulenta | scaffold45.g78.t1 | AAD32577.1 | Scox-3 homeodomain protein, partial [Cassiopea xamachana] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Morbakka virulenta | scaffold5.g160.t1 | CAA72534.1 | Cn-ems protein [Hydractinia symbiolongicarpus] | Q804S6 Homeobox protein EMX1 OS=Danio rerio OX=7955 GN=emx1 PE=2 SV | JBrowse |
| Morbakka virulenta | scaffold59.g41.t1 | ACM62736.1 | Mox homeodomain transcription factor protein [Clytia hemisphaerica] | F1Q4R9 Homeobox protein MOX-1 OS=Danio rerio OX=7955 GN=meox1 PE=2 | JBrowse |
| Morbakka virulenta | scaffold7.g177.t1 | NXX65280.1 | HXD3 protein [Spizella passerina] | Q9IA21 Homeobox protein Hox-A3 OS=Heterodontus francisci OX=7792 GN | JBrowse |
| Morbakka virulenta | scaffold70.g42.t1 | UES72733.1 | Cnox-2-like protein [Rhopilema esculentum] | P17138 Homeobox protein HTR-A2 (Fragment) OS=Helobdella triserialis | JBrowse |
| Morbakka virulenta | scaffold70.g42.t2 | UES72733.1 | Cnox-2-like protein [Rhopilema esculentum] | P17138 Homeobox protein HTR-A2 (Fragment) OS=Helobdella triserialis | JBrowse |
