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Support counts the member genes carrying the term. % of genes is that count over all 213 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13007 | PRE-MRNA SPLICING FACTOR-RELATED | 183 / 213 | 85.9% | 98.4% of 186 | ≥80% support |
| GO | GO:0000350 Biological Process | generation of catalytic spliceosome for second transesterification step | 183 / 213 | 85.9% | 97.9% of 187 | ≥80% support |
| GO | GO:0005682 Cellular Component | U5 snRNP | 183 / 213 | 85.9% | 97.9% of 187 | ≥80% support |
| GO | GO:0008380 Biological Process | RNA splicing | 183 / 213 | 85.9% | 97.9% of 187 | ≥80% support |
| GO | GO:0046540 Cellular Component | U4/U6 x U5 tri-snRNP complex | 183 / 213 | 85.9% | 97.9% of 187 | ≥80% support |
| GO | GO:0071021 Cellular Component | U2-type post-spliceosomal complex | 183 / 213 | 85.9% | 97.9% of 187 | ≥80% support |
| Pfam | PF02840 | Prp18 | 170 / 213 | 79.8% | 90.4% of 188 | ≥50% support |
| Pfam | PF08799 | PRP4 | 167 / 213 | 78.4% | 88.8% of 188 | ≥50% support |
| GO | GO:0005681 Cellular Component | spliceosomal complex | 170 / 213 | 79.8% | 90.9% of 187 | ≥50% support |
| KEGG | K12817 | PRPF18, PRP18 — Spliceosome | 151 / 213 | 70.9% | 98.7% of 153 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Nematostella vectensis | XP_032241622.1 | XP_032241622.1 | pre-mRNA-splicing factor 18 [Nematostella vectensis] | Q6GMH0 Pre-mRNA-splicing factor 18 OS=Danio rerio OX=7955 GN=prpf18 | JBrowse |
