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Support counts the member genes carrying the term. % of genes is that count over all 137 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11193 | SMALL NUCLEAR RIBONUCLEOPROTEIN E | 126 / 137 | 92.0% | 100.0% of 126 | ≥80% support |
| Pfam | PF01423 | LSM | 126 / 137 | 92.0% | 100.0% of 126 | ≥80% support |
| GO | GO:0000387 Biological Process | spliceosomal snRNP assembly | 126 / 137 | 92.0% | 100.0% of 126 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 126 / 137 | 92.0% | 100.0% of 126 | ≥80% support |
| GO | GO:0005681 Cellular Component | spliceosomal complex | 126 / 137 | 92.0% | 100.0% of 126 | ≥80% support |
| GO | GO:0005682 Cellular Component | U5 snRNP | 126 / 137 | 92.0% | 100.0% of 126 | ≥80% support |
| GO | GO:0005685 Cellular Component | U1 snRNP | 126 / 137 | 92.0% | 100.0% of 126 | ≥80% support |
| GO | GO:0005686 Cellular Component | U2 snRNP | 126 / 137 | 92.0% | 100.0% of 126 | ≥80% support |
| GO | GO:0005687 Cellular Component | U4 snRNP | 126 / 137 | 92.0% | 100.0% of 126 | ≥80% support |
| GO | GO:0034715 Cellular Component | pICln-Sm protein complex | 126 / 137 | 92.0% | 100.0% of 126 | ≥80% support |
| GO | GO:0046540 Cellular Component | U4/U6 x U5 tri-snRNP complex | 126 / 137 | 92.0% | 100.0% of 126 | ≥80% support |
| GO | GO:0071011 Cellular Component | precatalytic spliceosome | 126 / 137 | 92.0% | 100.0% of 126 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 120 / 137 | 87.6% | 95.2% of 126 | ≥80% support |
| KEGG | K11097 | SNRPE, SME — DNA replication proteins | 124 / 137 | 90.5% | 100.0% of 124 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Orbicella faveolata | XP_020601956.1 | XP_020601956.1 | small nuclear ribonucleoprotein E-like [Orbicella faveolata] | Q7ZUG0 Small nuclear ribonucleoprotein E OS=Danio rerio OX=7955 GN= | JBrowse |