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This orthogroup contains 2,277 genes from 147 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 2,277 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00058 | Ldl_recept_b — Low-density lipoprotein receptor repeat class B | 1757 / 2,277 | 77.2% | 92.7% of 1,895 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3980948.1 | CAB3980948.1 | Hypothetical predicted protein [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Paramuricea clavata | CAB3983196.1 | CAB3983196.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Paramuricea clavata | CAB3983197.1 | CAB3983197.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Paramuricea clavata | CAB3983198.1 | CAB3983198.1 | Very low-density lipo receptor [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Paramuricea clavata | CAB3984880.1 | CAB3984880.1 | Hypothetical predicted protein [Paramuricea clavata] | G3V928 Prolow-density lipoprotein receptor-related protein 1 OS=Rat | JBrowse |
| Paramuricea clavata | CAB3985306.1 | CAB3985306.1 | low-density lipo receptor-related 6-like [Paramuricea clavata] | O75581 Low-density lipoprotein receptor-related protein 6 OS=Homo s | JBrowse |
| Paramuricea clavata | CAB3985358.1 | CAB3985358.1 | low-density lipo receptor-related 4-like isoform X1 [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Paramuricea clavata | CAB3988720.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Paramuricea clavata | CAB3992419.1 | CAB3992419.1 | agrin-like isoform X1 [Paramuricea clavata] | P25304 Agrin OS=Rattus norvegicus OX=10116 GN=Agrn PE=1 SV=2 | JBrowse |
| Paramuricea clavata | CAB4006415.1 | CAB4006415.1 | low-density lipo receptor-related 4 isoform X2 [Paramuricea clavata] | Q07954 Prolow-density lipoprotein receptor-related protein 1 OS=Hom | JBrowse |
| Paramuricea clavata | CAB4007042.1 | CAB4007042.1 | very low-density lipo receptor-like isoform X1, partial [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Paramuricea clavata | CAB4007043.1 | CAB4007043.1 | low-density lipo receptor-related 4 isoform X1 [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Paramuricea clavata | CAB4012868.1 | CAB4012868.1 | low-density lipo receptor-related 6-like [Paramuricea clavata] | Q91VN0 Low-density lipoprotein receptor-related protein 5 OS=Mus mu | JBrowse |
| Paramuricea clavata | CAB4015715.1 | CAB4015715.1 | low-density lipo receptor-related 4, partial [Paramuricea clavata] | P98158 Low-density lipoprotein receptor-related protein 2 OS=Rattus | JBrowse |
| Paramuricea clavata | CAB4016153.1 | CAB4016153.1 | prolow-density lipo receptor-related 1 [Paramuricea clavata] | A2ARV4 Low-density lipoprotein receptor-related protein 2 OS=Mus mu | JBrowse |
| Paramuricea clavata | CAB4017147.1 | CAB4017147.1 | low-density lipo receptor-related 2 isoform X1, partial [Paramuricea clavata] | A2ARV4 Low-density lipoprotein receptor-related protein 2 OS=Mus mu | JBrowse |
| Paramuricea clavata | CAB4017148.1 | CAB4017148.1 | low-density lipo receptor-related 2-like, partial [Paramuricea clavata] | A2ARV4 Low-density lipoprotein receptor-related protein 2 OS=Mus mu | JBrowse |
| Paramuricea clavata | CAB4017951.1 | CAB4017951.1 | low-density lipo receptor-related 5 [Paramuricea clavata] | P98158 Low-density lipoprotein receptor-related protein 2 OS=Rattus | JBrowse |
| Paramuricea clavata | CAB4017952.1 | CAB4017952.1 | low-density lipo receptor-related 6 isoform X2 [Paramuricea clavata] | P98158 Low-density lipoprotein receptor-related protein 2 OS=Rattus | JBrowse |
| Paramuricea clavata | CAB4022413.1 | CAB4022413.1 | low-density lipo receptor-related 5, partial, partial [Paramuricea clavata] | P98163 Vitellogenin receptor Yl OS=Drosophila melanogaster OX=7227 | JBrowse |
