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This orthogroup contains 2,135 genes from 107 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 2,135 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR31165 | PROTEIN G1-LIKE2 | 1146 / 2,135 | 53.7% | 94.2% of 1,216 | ≥50% support |
| Pfam | PF04852 | ALOG_dom — ALOG domain | 1247 / 2,135 | 58.4% | 89.6% of 1,392 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 1301 / 2,135 | 60.9% | 74.3% of 1,752 | ≥50% support |
| GO | GO:0006310 Biological Process | DNA recombination | 1214 / 2,135 | 56.9% | 69.3% of 1,752 | ≥50% support |
| GO | GO:0015074 Biological Process | DNA integration | 1213 / 2,135 | 56.8% | 69.2% of 1,752 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 1148 / 2,135 | 53.8% | 65.5% of 1,752 | ≥50% support |
| GO | GO:0009299 Biological Process | mRNA transcription | 1146 / 2,135 | 53.7% | 65.4% of 1,752 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3980375.1 | CAB3980375.1 | LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB3981998.1 | CAB3981998.1 | LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB3984669.1 | CAB3984669.1 | LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB3992424.1 | CAB3992424.1 | Hypothetical predicted protein [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB3993772.1 | CAB3993772.1 | LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB3996884.1 | CAB3996884.1 | LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4002705.1 | CAB4002705.1 | Hypothetical predicted protein [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4009955.1 | CAB4009955.1 | LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4012290.1 | CAB4012290.1 | LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4012527.1 | CAB4012527.1 | LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4021083.1 | CAB4021083.1 | LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4026586.1 | CAB4026586.1 | LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4036042.1 | CAB4036042.1 | LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4041880.1 | CAB4041880.1 | LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [Paramuricea clavata] | – | JBrowse |
