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This orthogroup contains 1,949 genes from 147 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,949 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23430 | HISTONE H2A | 1720 / 1,949 | 88.3% | 98.6% of 1,745 | ≥80% support |
| Pfam | PF00125 | Histone | 1702 / 1,949 | 87.3% | 97.4% of 1,747 | ≥80% support |
| Pfam | PF16211 | Histone_H2A_C — C-terminus of histone H2A | 1693 / 1,949 | 86.9% | 96.9% of 1,747 | ≥80% support |
| GO | GO:0046982 Molecular Function | protein heterodimerization activity | 1733 / 1,949 | 88.9% | 99.8% of 1,736 | ≥80% support |
| GO | GO:0000786 Cellular Component | nucleosome | 1723 / 1,949 | 88.4% | 99.3% of 1,736 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 1723 / 1,949 | 88.4% | 99.3% of 1,736 | ≥80% support |
| GO | GO:0030527 Molecular Function | structural constituent of chromatin | 1723 / 1,949 | 88.4% | 99.3% of 1,736 | ≥80% support |
| GO | GO:0000790 Cellular Component | chromatin | 1719 / 1,949 | 88.2% | 99.0% of 1,736 | ≥80% support |
| GO | GO:0006342 Biological Process | heterochromatin formation | 1719 / 1,949 | 88.2% | 99.0% of 1,736 | ≥80% support |
| KEGG | K11251 | H2A — Exosome | 1664 / 1,949 | 85.4% | 99.6% of 1,671 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3977658.1 | CAB3977658.1 | histone H2A-like [Paramuricea clavata] | P04735 Late histone H2A.1 OS=Psammechinus miliaris OX=7660 PE=2 SV= | JBrowse |
| Paramuricea clavata | CAB3979440.1 | CAB3979440.1 | histone H2AX [Paramuricea clavata] | Q7ZUY3 Histone H2AX OS=Danio rerio OX=7955 GN=h2ax PE=2 SV=3 | JBrowse |
| Paramuricea clavata | CAB3990772.1 | XP_028413434.1 | histone H2A [Dendronephthya gigantea] | P35061 Histone H2A OS=Acropora formosa OX=126732 PE=3 SV=2 | JBrowse |
| Paramuricea clavata | CAB3993547.1 | CAB3993547.1 | histone H2AX [Paramuricea clavata] | Q96QV6 Histone H2A type 1-A OS=Homo sapiens OX=9606 GN=H2AC1 PE=1 S | JBrowse |
| Paramuricea clavata | CAB3994376.1 | CAB3994376.1 | core histone macro- -like [Paramuricea clavata] | Q02874 Core histone macro-H2A.1 OS=Rattus norvegicus OX=10116 GN=Ma | JBrowse |
| Paramuricea clavata | CAB3994377.1 | CAB3994377.1 | core histone macro- -like [Paramuricea clavata] | Q02874 Core histone macro-H2A.1 OS=Rattus norvegicus OX=10116 GN=Ma | JBrowse |
| Paramuricea clavata | CAB4004017.1 | XP_028413434.1 | histone H2A [Dendronephthya gigantea] | P35061 Histone H2A OS=Acropora formosa OX=126732 PE=3 SV=2 | JBrowse |
| Paramuricea clavata | CAB4032575.1 | CAB4032575.1 | Histone [Paramuricea clavata] | P08991 Histone H2A.V (Fragment) OS=Strongylocentrotus purpuratus OX | JBrowse |
| Paramuricea clavata | CAB4038429.1 | CAB3977658.1 | histone H2A-like [Paramuricea clavata] | P04735 Late histone H2A.1 OS=Psammechinus miliaris OX=7660 PE=2 SV= | JBrowse |
