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Support counts the member genes carrying the term. % of genes is that count over all 1,744 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR18945 | NEUROTRANSMITTER GATED ION CHANNEL | 1547 / 1,744 | 88.7% | 99.8% of 1,550 | ≥80% support |
| Pfam | PF02931 | Neur_chan_LBD — Neurotransmitter-gated ion-channel ligand binding domain | 1454 / 1,744 | 83.4% | 91.2% of 1,595 | ≥80% support |
| Pfam | PF02932 | Neur_chan_memb — Neurotransmitter-gated ion-channel transmembrane region | 1452 / 1,744 | 83.3% | 91.0% of 1,595 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 1622 / 1,744 | 93.0% | 100.0% of 1,622 | ≥80% support |
| GO | GO:0006811 Biological Process | monoatomic ion transport | 1622 / 1,744 | 93.0% | 100.0% of 1,622 | ≥80% support |
| GO | GO:0005216 Molecular Function | monoatomic ion channel activity | 1566 / 1,744 | 89.8% | 96.6% of 1,622 | ≥80% support |
| GO | GO:0034220 Biological Process | monoatomic ion transmembrane transport | 1566 / 1,744 | 89.8% | 96.6% of 1,622 | ≥80% support |
| GO | GO:0004888 Molecular Function | transmembrane signaling receptor activity | 1566 / 1,744 | 89.8% | 96.6% of 1,622 | ≥80% support |
| GO | GO:0007165 Biological Process | signal transduction | 1547 / 1,744 | 88.7% | 95.4% of 1,622 | ≥80% support |
| GO | GO:0007268 Biological Process | chemical synaptic transmission | 1547 / 1,744 | 88.7% | 95.4% of 1,622 | ≥80% support |
| GO | GO:0005887 Cellular Component | plasma membrane | 1547 / 1,744 | 88.7% | 95.4% of 1,622 | ≥80% support |
| GO | GO:0030594 Molecular Function | neurotransmitter receptor activity | 1547 / 1,744 | 88.7% | 95.4% of 1,622 | ≥80% support |
| GO | GO:0042391 Biological Process | regulation of membrane potential | 1547 / 1,744 | 88.7% | 95.4% of 1,622 | ≥80% support |
| GO | GO:0043005 Cellular Component | neuron projection | 1547 / 1,744 | 88.7% | 95.4% of 1,622 | ≥80% support |
| GO | GO:0045202 Cellular Component | synapse | 1547 / 1,744 | 88.7% | 95.4% of 1,622 | ≥80% support |
| GO | GO:0050877 Biological Process | nervous system process | 1547 / 1,744 | 88.7% | 95.4% of 1,622 | ≥80% support |
| GO | GO:0005254 Molecular Function | chloride channel activity | 1536 / 1,744 | 88.1% | 94.7% of 1,622 | ≥80% support |
| GO | GO:1902476 Biological Process | chloride transmembrane transport | 1536 / 1,744 | 88.1% | 94.7% of 1,622 | ≥80% support |
| GO | GO:1904315 Molecular Function | transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential | 1536 / 1,744 | 88.1% | 94.7% of 1,622 | ≥80% support |
| GO | GO:0005231 Molecular Function | excitatory extracellular ligand-gated monoatomic ion channel activity | 1536 / 1,744 | 88.1% | 94.7% of 1,622 | ≥80% support |
| GO | GO:0005230 Molecular Function | extracellular ligand-gated monoatomic ion channel activity | 1497 / 1,744 | 85.8% | 92.3% of 1,622 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3992054.1 | CAB3992054.1 | gamma-aminobutyric acid receptor alpha-like [Paramuricea clavata] | P24046 Gamma-aminobutyric acid receptor subunit rho-1 OS=Homo sapie | JBrowse |
| Paramuricea clavata | CAB3992057.1 | CAB3992057.1 | gamma-aminobutyric acid receptor alpha-like [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4018271.1 | CAB4018271.1 | gamma-aminobutyric acid receptor alpha-like, partial [Paramuricea clavata] | P22300 Gamma-aminobutyric acid receptor subunit gamma-2 OS=Bos taur | JBrowse |
| Paramuricea clavata | CAB4018272.1 | CAB4018272.1 | gamma-aminobutyric acid receptor alpha-like [Paramuricea clavata] | P22300 Gamma-aminobutyric acid receptor subunit gamma-2 OS=Bos taur | JBrowse |
| Paramuricea clavata | CAB4029526.1 | CAB4029526.1 | gamma-aminobutyric acid receptor alpha-like, partial [Paramuricea clavata] | P28476 Gamma-aminobutyric acid receptor subunit rho-2 OS=Homo sapie | JBrowse |
| Paramuricea clavata | CAB4029527.1 | CAB4029527.1 | gamma-aminobutyric acid receptor alpha-like, partial [Paramuricea clavata] | P50572 Gamma-aminobutyric acid receptor subunit rho-1 OS=Rattus nor | JBrowse |
| Paramuricea clavata | CAB4035070.1 | CAB4035070.1 | gamma-aminobutyric acid receptor alpha-like, partial [Paramuricea clavata] | P24046 Gamma-aminobutyric acid receptor subunit rho-1 OS=Homo sapie | JBrowse |
| Paramuricea clavata | CAB4035071.1 | CAB4035071.1 | gamma-aminobutyric acid receptor alpha-like, partial [Paramuricea clavata] | P24046 Gamma-aminobutyric acid receptor subunit rho-1 OS=Homo sapie | JBrowse |
| Paramuricea clavata | CAB4037325.1 | CAB4037325.1 | gamma-aminobutyric acid receptor alpha-like, partial [Paramuricea clavata] | F1R8P4 Glycine receptor subunit alpha-2 OS=Danio rerio OX=7955 GN=g | JBrowse |
| Paramuricea clavata | CAB4037702.1 | CAB4037702.1 | gamma-aminobutyric acid receptor subunit alpha-2-like [Paramuricea clavata] | Q94900 Glutamate-gated chloride channel OS=Drosophila melanogaster | JBrowse |
