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This orthogroup contains 565 genes from 148 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 565 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11203 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER | 482 / 565 | 85.3% | 99.6% of 484 | ≥80% support |
| GO | GO:0004521 Molecular Function | RNA endonuclease activity | 482 / 565 | 85.3% | 99.6% of 484 | ≥80% support |
| Pfam | PF10996 | Beta-Casp | 431 / 565 | 76.3% | 86.4% of 499 | ≥50% support |
| Pfam | PF07521 | RMMBL — Zn-dependent metallo-hydrolase RNA specificity domain | 403 / 565 | 71.3% | 80.8% of 499 | ≥50% support |
| Pfam | PF16661 | Lactamase_B_6 — Metallo-beta-lactamase superfamily domain | 395 / 565 | 69.9% | 79.2% of 499 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3991602.1 | CAB3991602.1 | Hypothetical predicted protein [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB3991608.1 | CAB3991608.1 | Hypothetical predicted protein, partial [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4016242.1 | CAB4016242.1 | cleavage and polyadenylation specificity factor subunit 3 isoform X2 [Paramuricea clavata] | Q9QXK7 Cleavage and polyadenylation specificity factor subunit 3 OS | JBrowse |
| Paramuricea clavata | CAB4031531.1 | CAB4031531.1 | Hypothetical predicted protein, partial [Paramuricea clavata] | P79101 Cleavage and polyadenylation specificity factor subunit 3 OS | JBrowse |
| Paramuricea clavata | CAB4038168.1 | CAB4038168.1 | Hypothetical predicted protein, partial [Paramuricea clavata] | P79101 Cleavage and polyadenylation specificity factor subunit 3 OS | JBrowse |
| Paramuricea clavata | CAB4038939.1 | CAB4038939.1 | Hypothetical predicted protein, partial [Paramuricea clavata] | P79101 Cleavage and polyadenylation specificity factor subunit 3 OS | JBrowse |
| Paramuricea clavata | CAB4043299.1 | CAB4043299.1 | Integrator complex subunit 11, partial [Paramuricea clavata] | Q503E1 Integrator complex subunit 11 OS=Danio rerio OX=7955 GN=cpsf | JBrowse |
