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This orthogroup contains 483 genes from 147 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 483 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11586 | TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER | 357 / 483 | 73.9% | 83.8% of 426 | ≥50% support |
| Pfam | PF01588 | tRNA_bind — Putative tRNA binding domain | 361 / 483 | 74.7% | 86.0% of 420 | ≥50% support |
| GO | GO:0000049 Molecular Function | tRNA binding | 364 / 483 | 75.4% | 85.3% of 427 | ≥50% support |
| GO | GO:0004831 Molecular Function | tyrosine-tRNA ligase activity | 243 / 483 | 50.3% | 56.9% of 427 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3998297.1 | CAB3998297.1 | aminoacyl tRNA synthase complex-interacting multifunctional 1, partial [Paramuricea clavata] | O54873 Aminoacyl tRNA synthase complex-interacting multifunctional | JBrowse |
| Paramuricea clavata | CAB4002568.1 | CAB4002568.1 | Tyrosine--tRNA ligase, cytoplasmic, partial [Paramuricea clavata] | Q5ZJ08 Tyrosine--tRNA ligase, cytoplasmic OS=Gallus gallus OX=9031 | JBrowse |
| Paramuricea clavata | CAB4006668.1 | CAB4006668.1 | aminoacyl tRNA synthase complex-interacting multifunctional 1 isoform X2, partial [Paramuricea clavata] | O54873 Aminoacyl tRNA synthase complex-interacting multifunctional | JBrowse |
| Paramuricea clavata | CAB4006669.1 | CAB4006669.1 | aminoacyl tRNA synthase complex-interacting multifunctional 1 isoform X2, partial [Paramuricea clavata] | O54873 Aminoacyl tRNA synthase complex-interacting multifunctional | JBrowse |
| Paramuricea clavata | CAB4006670.1 | CAB4006670.1 | aminoacyl tRNA synthase complex-interacting multifunctional 1 isoform X2 [Paramuricea clavata] | O54873 Aminoacyl tRNA synthase complex-interacting multifunctional | JBrowse |
| Paramuricea clavata | CAB4026258.1 | CAB4026258.1 | Tyrosine--tRNA ligase, cytoplasmic, partial [Paramuricea clavata] | Q6TGS6 Tyrosine--tRNA ligase, cytoplasmic OS=Danio rerio OX=7955 GN | JBrowse |
| Paramuricea clavata | CAB4026259.1 | CAB4026259.1 | tyrosine--tRNA ligase, cytoplasmic, partial [Paramuricea clavata] | Q6TGS6 Tyrosine--tRNA ligase, cytoplasmic OS=Danio rerio OX=7955 GN | JBrowse |
| Paramuricea clavata | CAB4043114.1 | CAB4043114.1 | tyrosine--tRNA ligase, cytoplasmic isoform X4, partial [Paramuricea clavata] | Q5ZJ08 Tyrosine--tRNA ligase, cytoplasmic OS=Gallus gallus OX=9031 | JBrowse |
| Paramuricea clavata | CAB4043115.1 | CAB4043115.1 | tyrosine--tRNA ligase, cytoplasmic isoform X4, partial [Paramuricea clavata] | Q5ZJ08 Tyrosine--tRNA ligase, cytoplasmic OS=Gallus gallus OX=9031 | JBrowse |
