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This orthogroup contains 482 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 482 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10071 | TRANSCRIPTION FACTOR GATA FAMILY MEMBER | 402 / 482 | 83.4% | 99.8% of 403 | ≥80% support |
| Pfam | PF00320 | GATA | 403 / 482 | 83.6% | 99.8% of 404 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 405 / 482 | 84.0% | 99.8% of 406 | ≥80% support |
| GO | GO:0043565 Molecular Function | sequence-specific DNA binding | 405 / 482 | 84.0% | 99.8% of 406 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 404 / 482 | 83.8% | 99.5% of 406 | ≥80% support |
| GO | GO:0000122 Biological Process | negative regulation of transcription by RNA polymerase II | 402 / 482 | 83.4% | 99.0% of 406 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 402 / 482 | 83.4% | 99.0% of 406 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 402 / 482 | 83.4% | 99.0% of 406 | ≥80% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 402 / 482 | 83.4% | 99.0% of 406 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 402 / 482 | 83.4% | 99.0% of 406 | ≥80% support |
| GO | GO:0045944 Biological Process | positive regulation of transcription by RNA polymerase II | 402 / 482 | 83.4% | 99.0% of 406 | ≥80% support |
| GO | GO:0045165 Biological Process | cell fate commitment | 386 / 482 | 80.1% | 95.1% of 406 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 312 / 482 | 64.7% | 76.9% of 406 | ≥50% support |
| KEGG | K17894 | GATA2 — Transcription factors | 303 / 482 | 62.9% | 96.8% of 313 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3984766.1 | CAB3984766.1 | GATA-binding factor 2-like isoform X3 [Paramuricea clavata] | P23770 GATA-binding factor 2 OS=Xenopus laevis OX=8355 GN=gata2 PE= | JBrowse |
