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This orthogroup contains 463 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 463 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45623 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED | 346 / 463 | 74.7% | 94.8% of 365 | ≥50% support |
| Pfam | PF00176 | SNF2-rel_dom — SNF2-related domain | 304 / 463 | 65.7% | 76.4% of 398 | ≥50% support |
| Pfam | PF08074 | CHDCT2 | 300 / 463 | 64.8% | 75.4% of 398 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 298 / 463 | 64.4% | 74.9% of 398 | ≥50% support |
| Pfam | PF06465 | DUF1087 | 295 / 463 | 63.7% | 74.1% of 398 | ≥50% support |
| Pfam | PF00385 | Chromo | 287 / 463 | 62.0% | 72.1% of 398 | ≥50% support |
| Pfam | PF06461 | CHDII_SANT-like — CHD subfamily II, SANT-like domain | 286 / 463 | 61.8% | 71.9% of 398 | ≥50% support |
| Pfam | PF00628 | PHD | 276 / 463 | 59.6% | 69.4% of 398 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 348 / 463 | 75.2% | 97.5% of 357 | ≥50% support |
| GO | GO:0006338 Biological Process | chromatin remodeling | 348 / 463 | 75.2% | 97.5% of 357 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 348 / 463 | 75.2% | 97.5% of 357 | ≥50% support |
| GO | GO:0016887 Molecular Function | ATP hydrolysis activity | 347 / 463 | 75.0% | 97.2% of 357 | ≥50% support |
| GO | GO:0003682 Molecular Function | chromatin binding | 347 / 463 | 75.0% | 97.2% of 357 | ≥50% support |
| GO | GO:0140658 Molecular Function | ATP-dependent chromatin remodeler activity | 346 / 463 | 74.7% | 96.9% of 357 | ≥50% support |
| GO | GO:0042393 Molecular Function | histone binding | 346 / 463 | 74.7% | 96.9% of 357 | ≥50% support |
| GO | GO:0000785 Cellular Component | chromatin | 346 / 463 | 74.7% | 96.9% of 357 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 306 / 463 | 66.1% | 85.7% of 357 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB4005325.1 | CAB4005325.1 | chromodomain-helicase-DNA-binding 3 isoform X3, partial [Paramuricea clavata] | Q12873 Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens | JBrowse |
| Paramuricea clavata | CAB4005326.1 | CAB4005326.1 | chromodomain-helicase-DNA-binding 3-like isoform X1 [Paramuricea clavata] | Q12873 Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens | JBrowse |
| Paramuricea clavata | CAB4022527.1 | CAB4022527.1 | Hypothetical predicted protein, partial [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4031235.1 | CAB4031235.1 | chromodomain-helicase-DNA-binding 4-like isoform X3, partial [Paramuricea clavata] | Q12873 Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens | JBrowse |
| Paramuricea clavata | CAB4031236.1 | CAB4031236.1 | chromodomain-helicase-DNA-binding 4-like isoform X3, partial [Paramuricea clavata] | Q14839 Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens | JBrowse |
