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This orthogroup contains 445 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 445 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11953 | EXOSOME COMPLEX COMPONENT | 381 / 445 | 85.6% | 98.5% of 387 | ≥80% support |
| Pfam | PF01138 | RNase_PH — 3' exoribonuclease family, domain 1 | 379 / 445 | 85.2% | 99.2% of 382 | ≥80% support |
| GO | GO:0000176 Cellular Component | nuclear exosome (RNase complex) | 381 / 445 | 85.6% | 98.7% of 386 | ≥80% support |
| GO | GO:0000177 Cellular Component | cytoplasmic exosome (RNase complex) | 381 / 445 | 85.6% | 98.7% of 386 | ≥80% support |
| GO | GO:0005730 Cellular Component | nucleolus | 381 / 445 | 85.6% | 98.7% of 386 | ≥80% support |
| GO | GO:0016075 Biological Process | rRNA catabolic process | 381 / 445 | 85.6% | 98.7% of 386 | ≥80% support |
| GO | GO:0034427 Biological Process | obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' | 381 / 445 | 85.6% | 98.7% of 386 | ≥80% support |
| GO | GO:0034475 Biological Process | U4 snRNA 3'-end processing | 381 / 445 | 85.6% | 98.7% of 386 | ≥80% support |
| GO | GO:0071028 Biological Process | nuclear mRNA surveillance | 381 / 445 | 85.6% | 98.7% of 386 | ≥80% support |
| GO | GO:0071051 Biological Process | poly(A)-dependent snoRNA 3'-end processing | 381 / 445 | 85.6% | 98.7% of 386 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3983926.1 | CAB3983926.1 | exosome complex component RRP41-like [Paramuricea clavata] | Q9NPD3 Exosome complex component RRP41 OS=Homo sapiens OX=9606 GN=E | JBrowse |
| Paramuricea clavata | CAB3989570.1 | CAB3989570.1 | exosome complex component MTR3-like, partial [Paramuricea clavata] | Q6P0I8 Exosome complex component MTR3 OS=Danio rerio OX=7955 GN=exo | JBrowse |
| Paramuricea clavata | CAB3989571.1 | CAB3989571.1 | exosome complex component MTR3-like, partial [Paramuricea clavata] | Q6P0I8 Exosome complex component MTR3 OS=Danio rerio OX=7955 GN=exo | JBrowse |
| Paramuricea clavata | CAB3989572.1 | CAB3989572.1 | exosome complex component MTR3-like [Paramuricea clavata] | Q6P0I8 Exosome complex component MTR3 OS=Danio rerio OX=7955 GN=exo | JBrowse |
