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This orthogroup contains 405 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 405 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0005509 Molecular Function | calcium ion binding | 339 / 405 | 83.7% | 99.7% of 340 | ≥80% support |
| Pfam | PF00028 | Cadherin | 233 / 405 | 57.5% | 73.3% of 318 | ≥50% support |
| GO | GO:0016020 Cellular Component | membrane | 297 / 405 | 73.3% | 87.4% of 340 | ≥50% support |
| GO | GO:0007156 Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | 295 / 405 | 72.8% | 86.8% of 340 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3981167.1 | CAB3981167.1 | protocadherin Fat 4-like, partial [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB3985637.1 | CAB3985637.1 | protocadherin Fat 4-like [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB3985638.1 | CAB3985637.1 | protocadherin Fat 4-like [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB3985639.1 | CAB3985639.1 | protocadherin Fat 4-like [Paramuricea clavata] | Q6PB90 Protocadherin beta-14 OS=Mus musculus OX=10090 GN=Pcdhb14 PE | JBrowse |
| Paramuricea clavata | CAB3995019.1 | CAB3995019.1 | protocadherin Fat 4-like [Paramuricea clavata] | Q9VW71 Fat-like cadherin-related tumor suppressor homolog OS=Drosop | JBrowse |
| Paramuricea clavata | CAB4022040.1 | CAB4022040.1 | matrilin-2-like [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4022041.1 | CAB4022041.1 | matrilin-2-like [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4023992.1 | CAB4023992.1 | protocadherin Fat 4-like, partial [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4044154.1 | CAB4044154.1 | Listeria Bacterioides repeat-containing, partial [Paramuricea clavata] | O88277 Protocadherin Fat 2 OS=Rattus norvegicus OX=10116 GN=Fat2 PE | JBrowse |
