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This orthogroup contains 390 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 390 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23198 | NUCLEOPORIN | 265 / 390 | 68.0% | 97.8% of 271 | ≥50% support |
| Pfam | PF12110 | Nup96 — Nuclear protein 96 | 239 / 390 | 61.3% | 75.9% of 315 | ≥50% support |
| Pfam | PF04096 | Nucleoporin2 — Nucleoporin autopeptidase | 238 / 390 | 61.0% | 75.6% of 315 | ≥50% support |
| Pfam | PF21240 | Nup98_GLEBS — Nup98, Gle2-binding sequence | 220 / 390 | 56.4% | 69.8% of 315 | ≥50% support |
| GO | GO:0005643 Cellular Component | nuclear pore | 267 / 390 | 68.5% | 98.2% of 272 | ≥50% support |
| GO | GO:0017056 Molecular Function | structural constituent of nuclear pore | 266 / 390 | 68.2% | 97.8% of 272 | ≥50% support |
| GO | GO:0000973 Biological Process | post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery | 262 / 390 | 67.2% | 96.3% of 272 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 262 / 390 | 67.2% | 96.3% of 272 | ≥50% support |
| GO | GO:0006405 Biological Process | RNA export from nucleus | 262 / 390 | 67.2% | 96.3% of 272 | ≥50% support |
| GO | GO:0006606 Biological Process | protein import into nucleus | 262 / 390 | 67.2% | 96.3% of 272 | ≥50% support |
| GO | GO:0008139 Molecular Function | nuclear localization sequence binding | 262 / 390 | 67.2% | 96.3% of 272 | ≥50% support |
| GO | GO:0034398 Biological Process | telomere tethering at nuclear periphery | 262 / 390 | 67.2% | 96.3% of 272 | ≥50% support |
| GO | GO:0044614 Cellular Component | nuclear pore cytoplasmic filaments | 262 / 390 | 67.2% | 96.3% of 272 | ≥50% support |
| GO | GO:0006913 Biological Process | nucleocytoplasmic transport | 238 / 390 | 61.0% | 87.5% of 272 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3984036.1 | CAB3984036.1 | nuclear pore complex Nup98-Nup96-like [Paramuricea clavata] | P49793 Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicu | JBrowse |
| Paramuricea clavata | CAB4003115.1 | CAB4003115.1 | nuclear pore complex Nup98-Nup96 isoform X1, partial [Paramuricea clavata] | P49793 Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicu | JBrowse |
| Paramuricea clavata | CAB4003116.1 | CAB4003116.1 | nuclear pore complex Nup98-Nup96 isoform X1, partial [Paramuricea clavata] | P49793 Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicu | JBrowse |
| Paramuricea clavata | CAB4026710.1 | CAB4026710.1 | nuclear pore complex Nup98-Nup96-like, partial [Paramuricea clavata] | P49793 Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicu | JBrowse |
| Paramuricea clavata | CAB4026711.1 | CAB4026711.1 | nuclear pore complex Nup98-Nup96-like, partial [Paramuricea clavata] | P49793 Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicu | JBrowse |
| Paramuricea clavata | CAB4044567.1 | CAB4044567.1 | nuclear pore complex Nup98-Nup96-like, partial [Paramuricea clavata] | – | JBrowse |
