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This orthogroup contains 362 genes from 148 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 362 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10890 | CYSTEINYL-TRNA SYNTHETASE | 309 / 362 | 85.4% | 99.7% of 310 | ≥80% support |
| Pfam | PF01406 | tRNA-synt_1e — tRNA synthetases class I (C) catalytic domain | 299 / 362 | 82.6% | 98.7% of 303 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 310 / 362 | 85.6% | 100.0% of 310 | ≥80% support |
| GO | GO:0004817 Molecular Function | cysteine-tRNA ligase activity | 309 / 362 | 85.4% | 99.7% of 310 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 309 / 362 | 85.4% | 99.7% of 310 | ≥80% support |
| GO | GO:0006423 Biological Process | cysteinyl-tRNA aminoacylation | 309 / 362 | 85.4% | 99.7% of 310 | ≥80% support |
| GO | GO:0000166 Molecular Function | nucleotide binding | 218 / 362 | 60.2% | 70.3% of 310 | ≥50% support |
| GO | GO:0004812 Molecular Function | aminoacyl-tRNA ligase activity | 218 / 362 | 60.2% | 70.3% of 310 | ≥50% support |
| GO | GO:0006418 Biological Process | tRNA aminoacylation for protein translation | 218 / 362 | 60.2% | 70.3% of 310 | ≥50% support |
| KEGG | K01883 | CARS, cysS — Transfer RNA biogenesis | 197 / 362 | 54.4% | 98.0% of 201 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3980341.1 | CAB3980341.1 | cysteine--tRNA ligase, cytoplasmic isoform X2 [Paramuricea clavata] | Q4R550 Cysteine--tRNA ligase, cytoplasmic OS=Macaca fascicularis OX | JBrowse |
| Paramuricea clavata | CAB4019378.1 | CAB4019378.1 | cysteine--tRNA ligase, cytoplasmic-like, partial [Paramuricea clavata] | Q5F408 Cysteine--tRNA ligase, cytoplasmic OS=Gallus gallus OX=9031 | JBrowse |
| Paramuricea clavata | CAB4019379.1 | CAB4019379.1 | Cysteine--tRNA ligase, cytoplasmic, partial [Paramuricea clavata] | Q5F408 Cysteine--tRNA ligase, cytoplasmic OS=Gallus gallus OX=9031 | JBrowse |
