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Support counts the member genes carrying the term. % of genes is that count over all 331 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR14202 | 60 KDA RIBONUCLEOPROTEIN SSA/RO | 295 / 331 | 89.1% | 100.0% of 295 | ≥80% support |
| Pfam | PF05731 | TROVE | 284 / 331 | 85.8% | 99.7% of 285 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 295 / 331 | 89.1% | 100.0% of 295 | ≥80% support |
| GO | GO:1990904 Cellular Component | ribonucleoprotein complex | 295 / 331 | 89.1% | 100.0% of 295 | ≥80% support |
| KEGG | K11089 | TROVE2, SSA2 — Systemic lupus erythematosus | 224 / 331 | 67.7% | 99.6% of 225 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3992385.1 | CAB3992385.1 | 60 kDa SS-A Ro ribonucleo -like [Paramuricea clavata] | P10155 RNA-binding protein RO60 OS=Homo sapiens OX=9606 GN=RO60 PE= | JBrowse |
| Paramuricea clavata | CAB3992386.1 | CAB3992386.1 | 60 kDa SS-A Ro ribonucleo -like [Paramuricea clavata] | P10155 RNA-binding protein RO60 OS=Homo sapiens OX=9606 GN=RO60 PE= | JBrowse |
| Paramuricea clavata | CAB3994152.1 | CAB3994152.1 | 60 kDa SS-A Ro ribonucleo isoform X1, partial [Paramuricea clavata] | P10155 RNA-binding protein RO60 OS=Homo sapiens OX=9606 GN=RO60 PE= | JBrowse |
| Paramuricea clavata | CAB3994153.1 | CAB3994153.1 | 60 kDa SS-A Ro ribonucleo -like, partial [Paramuricea clavata] | P10155 RNA-binding protein RO60 OS=Homo sapiens OX=9606 GN=RO60 PE= | JBrowse |
| Paramuricea clavata | CAB4000495.1 | CAB4000495.1 | 60 kDa SS-A Ro ribonucleo [Paramuricea clavata] | P42700 RNA-binding protein RO60 OS=Xenopus laevis OX=8355 GN=ro60 P | JBrowse |
| Paramuricea clavata | CAB4000496.1 | CAB4000496.1 | 60 kDa SS-A Ro ribonucleo [Paramuricea clavata] | O08848 RNA-binding protein Ro60 OS=Mus musculus OX=10090 GN=RO60 PE | JBrowse |
| Paramuricea clavata | CAB4029662.1 | CAB4029662.1 | 60 kDa SS-A Ro ribonucleo, partial [Paramuricea clavata] | P42700 RNA-binding protein RO60 OS=Xenopus laevis OX=8355 GN=ro60 P | JBrowse |
| Paramuricea clavata | CAB4033353.1 | CAB4033353.1 | 60 kDa SS-A Ro ribonucleo [Paramuricea clavata] | P10155 RNA-binding protein RO60 OS=Homo sapiens OX=9606 GN=RO60 PE= | JBrowse |
| Paramuricea clavata | CAB4035748.1 | CAB4035748.1 | Hypothetical predicted protein [Paramuricea clavata] | P42700 RNA-binding protein RO60 OS=Xenopus laevis OX=8355 GN=ro60 P | JBrowse |
| Paramuricea clavata | CAB4036712.1 | CAB4036712.1 | 60 kDa SS-A Ro ribonucleo, partial [Paramuricea clavata] | P10155 RNA-binding protein RO60 OS=Homo sapiens OX=9606 GN=RO60 PE= | JBrowse |
| Paramuricea clavata | CAB4036713.1 | CAB4036713.1 | 60 kDa SS-A Ro ribonucleo, partial [Paramuricea clavata] | P10155 RNA-binding protein RO60 OS=Homo sapiens OX=9606 GN=RO60 PE= | JBrowse |
| Paramuricea clavata | CAB4038908.1 | CAB4038908.1 | 60 kDa SS-A Ro ribonucleo -like [Paramuricea clavata] | P10155 RNA-binding protein RO60 OS=Homo sapiens OX=9606 GN=RO60 PE= | JBrowse |
| Paramuricea clavata | CAB4038909.1 | CAB4038909.1 | 60 kDa SS-A Ro ribonucleo -like [Paramuricea clavata] | P10155 RNA-binding protein RO60 OS=Homo sapiens OX=9606 GN=RO60 PE= | JBrowse |
| Paramuricea clavata | CAB4038910.1 | CAB4038910.1 | 60 kDa SS-A Ro ribonucleo -like [Paramuricea clavata] | P10155 RNA-binding protein RO60 OS=Homo sapiens OX=9606 GN=RO60 PE= | JBrowse |
