← Back to the gene family browser
This orthogroup contains 298 genes from 120 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 298 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13620 | 3-5 EXONUCLEASE | 261 / 298 | 87.6% | 99.2% of 263 | ≥80% support |
| Pfam | PF01612 | DNA_pol_A_exo1 — 3'-5' exonuclease | 261 / 298 | 87.6% | 98.5% of 265 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 267 / 298 | 89.6% | 99.6% of 268 | ≥80% support |
| GO | GO:0008408 Molecular Function | 3'-5' exonuclease activity | 262 / 298 | 87.9% | 97.8% of 268 | ≥80% support |
| GO | GO:0006139 Biological Process | nucleobase-containing compound metabolic process | 261 / 298 | 87.6% | 97.4% of 268 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 192 / 298 | 64.4% | 71.6% of 268 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 191 / 298 | 64.1% | 71.3% of 268 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3985685.1 | CAB3985685.1 | Werner Syndrome-like exonuclease [Paramuricea clavata] | Q84LH3 3'-5' exonuclease OS=Arabidopsis thaliana OX=3702 GN=WEX PE= | JBrowse |
| Paramuricea clavata | CAB4001230.1 | CAB4001230.1 | Werner syndrome ATP-dependent helicase isoform X3 [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4013713.1 | CAB4013713.1 | Werner syndrome ATP-dependent helicase, partial [Paramuricea clavata] | Q9VGN7 Exonuclease 3'-5' domain-containing protein 2 OS=Drosophila | JBrowse |
