← Back to the gene family browser
This orthogroup contains 285 genes from 130 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 285 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0005515 Molecular Function | protein binding | 242 / 285 | 84.9% | 100.0% of 242 | ≥80% support |
| PANTHER | PTHR14063 | PROTEIN LIN-7 HOMOLOG | 184 / 285 | 64.6% | 77.0% of 239 | ≥50% support |
| Pfam | PF00595 | PDZ | 224 / 285 | 78.6% | 93.3% of 240 | ≥50% support |
| Pfam | PF02828 | L27 | 164 / 285 | 57.5% | 68.3% of 240 | ≥50% support |
| GO | GO:0016323 Cellular Component | basolateral plasma membrane | 197 / 285 | 69.1% | 81.4% of 242 | ≥50% support |
| GO | GO:0045202 Cellular Component | synapse | 185 / 285 | 64.9% | 76.5% of 242 | ≥50% support |
| GO | GO:0005911 Cellular Component | cell-cell junction | 184 / 285 | 64.6% | 76.0% of 242 | ≥50% support |
| GO | GO:0007269 Biological Process | neurotransmitter secretion | 184 / 285 | 64.6% | 76.0% of 242 | ≥50% support |
| GO | GO:0045199 Biological Process | maintenance of epithelial cell apical/basal polarity | 184 / 285 | 64.6% | 76.0% of 242 | ≥50% support |
| GO | GO:1903361 Biological Process | protein localization to basolateral plasma membrane | 184 / 285 | 64.6% | 76.0% of 242 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB4001065.1 | CAB4001065.1 | lin-7 homolog C-like [Paramuricea clavata] | Q0P5F3 Protein lin-7 homolog C OS=Bos taurus OX=9913 GN=LIN7C PE=2 | JBrowse |
| Paramuricea clavata | CAB4041875.1 | CAB4041875.1 | lin-7 homolog C, partial, partial [Paramuricea clavata] | Q0P5F3 Protein lin-7 homolog C OS=Bos taurus OX=9913 GN=LIN7C PE=2 | JBrowse |
