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This orthogroup contains 283 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 283 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10947 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 | 253 / 283 | 89.4% | 100.0% of 253 | ≥80% support |
| GO | GO:0004826 Molecular Function | phenylalanine-tRNA ligase activity | 253 / 283 | 89.4% | 100.0% of 253 | ≥80% support |
| GO | GO:0006432 Biological Process | phenylalanyl-tRNA aminoacylation | 253 / 283 | 89.4% | 100.0% of 253 | ≥80% support |
| GO | GO:0009328 Cellular Component | phenylalanine-tRNA ligase complex | 253 / 283 | 89.4% | 100.0% of 253 | ≥80% support |
| Pfam | PF17759 | tRNA_synthFbeta — Phenylalanyl tRNA synthetase beta chain CLM domain | 181 / 283 | 64.0% | 72.4% of 250 | ≥50% support |
| Pfam | PF03483 | B3_4 — B3/4 domain | 179 / 283 | 63.3% | 71.6% of 250 | ≥50% support |
| Pfam | PF18262 | PhetRS_B1 — Phe-tRNA synthetase beta subunit B1 domain | 179 / 283 | 63.3% | 71.6% of 250 | ≥50% support |
| Pfam | PF03484 | B5 | 156 / 283 | 55.1% | 62.4% of 250 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 188 / 283 | 66.4% | 74.3% of 253 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 178 / 283 | 62.9% | 70.4% of 253 | ≥50% support |
| GO | GO:0000287 Molecular Function | magnesium ion binding | 170 / 283 | 60.1% | 67.2% of 253 | ≥50% support |
| GO | GO:0000166 Molecular Function | nucleotide binding | 155 / 283 | 54.8% | 61.3% of 253 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 155 / 283 | 54.8% | 61.3% of 253 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3984429.1 | CAB3984429.1 | phenylalanine--tRNA ligase beta subunit-like [Paramuricea clavata] | Q9WUA2 Phenylalanine--tRNA ligase beta subunit OS=Mus musculus OX=1 | JBrowse |
| Paramuricea clavata | CAB3984430.1 | CAB3984430.1 | phenylalanine--tRNA ligase beta subunit [Paramuricea clavata] | Q9NSD9 Phenylalanine--tRNA ligase beta subunit OS=Homo sapiens OX=9 | JBrowse |
