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This orthogroup contains 283 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 283 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0005524 Molecular Function | ATP binding | 246 / 283 | 86.9% | 99.2% of 248 | ≥80% support |
| GO | GO:0003724 Molecular Function | RNA helicase activity | 236 / 283 | 83.4% | 95.2% of 248 | ≥80% support |
| PANTHER | PTHR47959 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | 217 / 283 | 76.7% | 98.6% of 220 | ≥50% support |
| Pfam | PF00270 | DEAD | 211 / 283 | 74.6% | 85.4% of 247 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 199 / 283 | 70.3% | 80.6% of 247 | ≥50% support |
| Pfam | PF08147 | DBP10CT | 185 / 283 | 65.4% | 74.9% of 247 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 211 / 283 | 74.6% | 85.1% of 248 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 188 / 283 | 66.4% | 75.8% of 248 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 185 / 283 | 65.4% | 74.6% of 248 | ≥50% support |
| KEGG | K14808 | DDX54, DBP10 — Ribosome biogenesis | 174 / 283 | 61.5% | 92.1% of 189 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3987285.1 | CAB3987285.1 | ATP-dependent RNA helicase DDX54 [Paramuricea clavata] | Q8K4L0 ATP-dependent RNA helicase DDX54 OS=Mus musculus OX=10090 GN | JBrowse |
