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This orthogroup contains 279 genes from 135 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 279 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10724 | 30S RIBOSOMAL PROTEIN S1 | 241 / 279 | 86.4% | 99.2% of 243 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 241 / 279 | 86.4% | 98.8% of 244 | ≥80% support |
| GO | GO:0003735 Molecular Function | structural constituent of ribosome | 241 / 279 | 86.4% | 98.8% of 244 | ≥80% support |
| GO | GO:0006412 Biological Process | translation | 241 / 279 | 86.4% | 98.8% of 244 | ≥80% support |
| Pfam | PF12836 | HHH_3 — Helix-hairpin-helix motif | 189 / 279 | 67.7% | 75.9% of 249 | ≥50% support |
| Pfam | PF00575 | S1 | 183 / 279 | 65.6% | 73.5% of 249 | ≥50% support |
| Pfam | PF16921 | Tex_YqgF — Tex protein YqgF-like domain | 179 / 279 | 64.2% | 71.9% of 249 | ≥50% support |
| Pfam | PF17674 | HHH_9 — HHH domain | 177 / 279 | 63.4% | 71.1% of 249 | ≥50% support |
| Pfam | PF09371 | Tex_N — Tex-like protein N-terminal domain | 174 / 279 | 62.4% | 69.9% of 249 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 188 / 279 | 67.4% | 77.1% of 244 | ≥50% support |
| GO | GO:0006139 Biological Process | nucleobase-containing compound metabolic process | 164 / 279 | 58.8% | 67.2% of 244 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3990707.1 | CAB3990707.1 | S1 RNA-binding domain-containing 1 [Paramuricea clavata] | Q8N5C6 S1 RNA-binding domain-containing protein 1 OS=Homo sapiens O | JBrowse |
| Paramuricea clavata | CAB4031416.1 | CAB4031416.1 | Hypothetical predicted protein, partial [Paramuricea clavata] | Q5RDI0 S1 RNA-binding domain-containing protein 1 OS=Pongo abelii O | JBrowse |
| Paramuricea clavata | CAB4041475.1 | CAB4041475.1 | S1 RNA-binding domain-containing 1 [Paramuricea clavata] | P57072 Uncharacterized protein NMA0194 OS=Neisseria meningitidis se | JBrowse |
| Paramuricea clavata | CAB4045803.1 | CAB4045803.1 | RNA-binding transcriptional accessory [Paramuricea clavata] | – | JBrowse |
