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This orthogroup contains 273 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 273 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0015031 Biological Process | protein transport | 227 / 273 | 83.2% | 99.1% of 229 | ≥80% support |
| GO | GO:0030123 Cellular Component | AP-3 adaptor complex | 227 / 273 | 83.2% | 99.1% of 229 | ≥80% support |
| PANTHER | PTHR22781 | DELTA ADAPTIN-RELATED | 217 / 273 | 79.5% | 99.1% of 219 | ≥50% support |
| Pfam | PF01602 | Adaptin_N — Adaptin N terminal region | 215 / 273 | 78.8% | 93.1% of 231 | ≥50% support |
| Pfam | PF06375 | AP3D1 — AP-3 complex subunit delta-1 | 201 / 273 | 73.6% | 87.0% of 231 | ≥50% support |
| GO | GO:0006623 Biological Process | protein targeting to vacuole | 217 / 273 | 79.5% | 94.8% of 229 | ≥50% support |
| GO | GO:0006896 Biological Process | Golgi to vacuole transport | 217 / 273 | 79.5% | 94.8% of 229 | ≥50% support |
| GO | GO:0010008 Cellular Component | endosome membrane | 217 / 273 | 79.5% | 94.8% of 229 | ≥50% support |
| GO | GO:0006886 Biological Process | intracellular protein transport | 216 / 273 | 79.1% | 94.3% of 229 | ≥50% support |
| GO | GO:0016192 Biological Process | vesicle-mediated transport | 216 / 273 | 79.1% | 94.3% of 229 | ≥50% support |
| GO | GO:0030117 Cellular Component | membrane coat | 215 / 273 | 78.8% | 93.9% of 229 | ≥50% support |
| KEGG | K12396 | AP3D — Membrane trafficking | 178 / 273 | 65.2% | 97.3% of 183 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB4009768.1 | CAB4009768.1 | AP-3 complex subunit delta-1, partial [Paramuricea clavata] | O14617 AP-3 complex subunit delta-1 OS=Homo sapiens OX=9606 GN=AP3D | JBrowse |
| Paramuricea clavata | CAB4009769.1 | CAB4009769.1 | AP-3 complex subunit delta-1, partial [Paramuricea clavata] | O14617 AP-3 complex subunit delta-1 OS=Homo sapiens OX=9606 GN=AP3D | JBrowse |
| Paramuricea clavata | CAB4017876.1 | CAB4017876.1 | AP-3 complex subunit delta-1-like, partial [Paramuricea clavata] | Q865S1 AP-3 complex subunit delta-1 OS=Bos taurus OX=9913 GN=AP3D1 | JBrowse |
| Paramuricea clavata | CAB4017877.1 | CAB4017877.1 | AP-3 complex subunit delta-1-like, partial [Paramuricea clavata] | Q865S1 AP-3 complex subunit delta-1 OS=Bos taurus OX=9913 GN=AP3D1 | JBrowse |
| Paramuricea clavata | CAB4027059.1 | CAB4027059.1 | AP-3 complex subunit delta-1-like [Paramuricea clavata] | O54774 AP-3 complex subunit delta-1 OS=Mus musculus OX=10090 GN=Ap3 | JBrowse |
