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This orthogroup contains 272 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 272 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46677 | SMC5-SMC6 COMPLEX LOCALIZATION FACTOR PROTEIN 1 | 217 / 272 | 79.8% | 96.4% of 225 | ≥50% support |
| Pfam | PF12796 | Ank_2 — Ankyrin repeats (3 copies) | 180 / 272 | 66.2% | 86.5% of 208 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 217 / 272 | 79.8% | 96.4% of 225 | ≥50% support |
| GO | GO:0006974 Biological Process | DNA damage response | 217 / 272 | 79.8% | 96.4% of 225 | ≥50% support |
| GO | GO:0035861 Cellular Component | site of double-strand break | 217 / 272 | 79.8% | 96.4% of 225 | ≥50% support |
| GO | GO:1990166 Biological Process | protein localization to site of double-strand break | 217 / 272 | 79.8% | 96.4% of 225 | ≥50% support |
| GO | GO:2000781 Biological Process | positive regulation of double-strand break repair | 217 / 272 | 79.8% | 96.4% of 225 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 190 / 272 | 69.9% | 84.4% of 225 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB4009329.1 | CAB4009329.1 | SMC5-SMC6 complex localization factor 1-like [Paramuricea clavata] | Q5H9F3 BCL-6 corepressor-like protein 1 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Paramuricea clavata | CAB4038094.1 | CAB4038094.1 | SMC5-SMC6 complex localization factor 1-like, partial [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4038095.1 | CAB4038095.1 | SMC5-SMC6 complex localization factor 1-like, partial [Paramuricea clavata] | – | JBrowse |
