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This orthogroup contains 258 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 258 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12881 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 1 | 212 / 258 | 82.2% | 99.5% of 213 | ≥80% support |
| GO | GO:0003712 Molecular Function | transcription coregulator activity | 212 / 258 | 82.2% | 99.5% of 213 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 212 / 258 | 82.2% | 99.5% of 213 | ≥80% support |
| GO | GO:0016592 Cellular Component | mediator complex | 212 / 258 | 82.2% | 99.5% of 213 | ≥80% support |
| Pfam | PF10744 | Med1 — Mediator of RNA polymerase II transcription subunit 1 | 198 / 258 | 76.7% | 99.5% of 199 | ≥50% support |
| KEGG | K15144 | MED1 — Transcription machinery | 149 / 258 | 57.8% | 97.4% of 153 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB4004492.1 | CAB4004492.1 | Mediator of RNA polymerase II transcription subunit 1 [Paramuricea clavata] | Q925J9 Mediator of RNA polymerase II transcription subunit 1 OS=Mus | JBrowse |
| Paramuricea clavata | CAB4006162.1 | CAB4006162.1 | mediator of RNA polymerase II transcription subunit 1-like, partial [Paramuricea clavata] | Q6INP8 Mediator of RNA polymerase II transcription subunit 1 OS=Xen | JBrowse |
| Paramuricea clavata | CAB4006163.1 | CAB4006163.1 | Mediator of RNA polymerase II transcription subunit 1, partial [Paramuricea clavata] | Q172G3 Mediator of RNA polymerase II transcription subunit 1 OS=Aed | JBrowse |
| Paramuricea clavata | CAB4006164.1 | CAB4006164.1 | Mediator of RNA polymerase II transcription subunit 1, partial [Paramuricea clavata] | Q172G3 Mediator of RNA polymerase II transcription subunit 1 OS=Aed | JBrowse |
| Paramuricea clavata | CAB4032572.1 | CAB4032572.1 | Mediator of RNA polymerase II transcription subunit 1 [Paramuricea clavata] | Q925J9 Mediator of RNA polymerase II transcription subunit 1 OS=Mus | JBrowse |
| Paramuricea clavata | CAB4034916.1 | CAB4034916.1 | mediator of RNA polymerase II transcription subunit 1-like, partial [Paramuricea clavata] | – | JBrowse |
