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This orthogroup contains 241 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 241 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR48039 | RNA-BINDING MOTIF PROTEIN 14B | 211 / 241 | 87.6% | 100.0% of 211 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 208 / 241 | 86.3% | 100.0% of 208 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 212 / 241 | 88.0% | 100.0% of 212 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 211 / 241 | 87.6% | 99.5% of 212 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 210 / 241 | 87.1% | 99.1% of 212 | ≥80% support |
| GO | GO:0005730 Cellular Component | nucleolus | 199 / 241 | 82.6% | 93.9% of 212 | ≥80% support |
| KEGG | K14573 | NOP4, RBM28 — Ribosome biogenesis | 180 / 241 | 74.7% | 99.5% of 181 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3995969.1 | CAB3995969.1 | RNA-binding 28-like [Paramuricea clavata] | Q8CGC6 RNA-binding protein 28 OS=Mus musculus OX=10090 GN=Rbm28 PE= | JBrowse |
| Paramuricea clavata | CAB4029267.1 | CAB4029267.1 | RNA-binding 28-like, partial [Paramuricea clavata] | O74400 Uncharacterized RNA-binding protein C4F6.14 OS=Schizosacchar | JBrowse |
| Paramuricea clavata | CAB4029268.1 | CAB4029268.1 | RNA-binding 28-like, partial [Paramuricea clavata] | O74400 Uncharacterized RNA-binding protein C4F6.14 OS=Schizosacchar | JBrowse |
