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This orthogroup contains 237 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 237 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12111 | SPLICING FACTOR YJU2 | 199 / 237 | 84.0% | 100.0% of 199 | ≥80% support |
| Pfam | PF04502 | Saf4_Yju2 — Saf4/Yju2 protein | 203 / 237 | 85.7% | 100.0% of 203 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 203 / 237 | 85.7% | 100.0% of 203 | ≥80% support |
| GO | GO:0005684 Cellular Component | U2-type spliceosomal complex | 199 / 237 | 84.0% | 98.0% of 203 | ≥80% support |
| GO | GO:0008380 Biological Process | RNA splicing | 199 / 237 | 84.0% | 98.0% of 203 | ≥80% support |
| GO | GO:0071014 Cellular Component | post-mRNA release spliceosomal complex | 199 / 237 | 84.0% | 98.0% of 203 | ≥80% support |
| KEGG | K13115 | CCDC130 — Spliceosome | 180 / 237 | 76.0% | 100.0% of 180 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3992551.1 | CAB3992551.1 | Hypothetical predicted protein [Paramuricea clavata] | P13994 Probable splicing factor YJU2B OS=Homo sapiens OX=9606 GN=YJ | JBrowse |
| Paramuricea clavata | CAB4013591.1 | CAB4013591.1 | Hypothetical predicted protein [Paramuricea clavata] | Q54TR4 Coiled-coil domain-containing protein 130 homolog OS=Dictyos | JBrowse |
