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This orthogroup contains 237 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 237 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10870 | CELL CYCLE CHECKPOINT PROTEIN RAD1 | 215 / 237 | 90.7% | 100.0% of 215 | ≥80% support |
| Pfam | PF02144 | Rad1 | 216 / 237 | 91.1% | 100.0% of 216 | ≥80% support |
| GO | GO:0000077 Biological Process | DNA damage checkpoint signaling | 216 / 237 | 91.1% | 100.0% of 216 | ≥80% support |
| GO | GO:0006281 Biological Process | DNA repair | 215 / 237 | 90.7% | 99.5% of 216 | ≥80% support |
| GO | GO:0030896 Cellular Component | checkpoint clamp complex | 215 / 237 | 90.7% | 99.5% of 216 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 213 / 237 | 89.9% | 98.6% of 216 | ≥80% support |
| GO | GO:0008408 Molecular Function | 3'-5' exonuclease activity | 213 / 237 | 89.9% | 98.6% of 216 | ≥80% support |
| KEGG | K02830 | HRAD1, RAD17 — DNA repair and recombination proteins | 181 / 237 | 76.4% | 99.5% of 182 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB4002681.1 | CAB4002681.1 | Cell cycle checkpoint RAD1, partial [Paramuricea clavata] | O60671 Cell cycle checkpoint protein RAD1 OS=Homo sapiens OX=9606 G | JBrowse |
| Paramuricea clavata | CAB4002682.1 | CAB4002682.1 | Cell cycle checkpoint RAD1, partial [Paramuricea clavata] | O60671 Cell cycle checkpoint protein RAD1 OS=Homo sapiens OX=9606 G | JBrowse |
| Paramuricea clavata | CAB4024679.1 | CAB4024679.1 | cell cycle checkpoint RAD1-like, partial [Paramuricea clavata] | O60671 Cell cycle checkpoint protein RAD1 OS=Homo sapiens OX=9606 G | JBrowse |
