← Back to the gene family browser
This orthogroup contains 236 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 236 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13115 | UNCHARACTERIZED | 193 / 236 | 81.8% | 98.5% of 196 | ≥80% support |
| Pfam | PF03126 | Plus-3 | 195 / 236 | 82.6% | 99.0% of 197 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 197 / 236 | 83.5% | 99.0% of 199 | ≥80% support |
| GO | GO:0016593 Cellular Component | Cdc73/Paf1 complex | 193 / 236 | 81.8% | 97.0% of 199 | ≥80% support |
| GO | GO:1990269 Molecular Function | RNA polymerase II C-terminal domain phosphoserine binding | 193 / 236 | 81.8% | 97.0% of 199 | ≥80% support |
| KEGG | K15178 | RTF1 — Transcription machinery | 174 / 236 | 73.7% | 98.9% of 176 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB4023079.1 | CAB4023079.1 | RNA polymerase-associated RTF1 homolog [Paramuricea clavata] | Q92541 RNA polymerase-associated protein RTF1 homolog OS=Homo sapie | JBrowse |
