← Back to the gene family browser
This orthogroup contains 235 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 235 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11024 | NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER | 208 / 235 | 88.5% | 100.0% of 208 | ≥80% support |
| Pfam | PF00400 | WD40 — WD domain, G-beta repeat | 188 / 235 | 80.0% | 100.0% of 188 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 212 / 235 | 90.2% | 100.0% of 212 | ≥80% support |
| GO | GO:0005198 Molecular Function | structural molecule activity | 208 / 235 | 88.5% | 98.1% of 212 | ≥80% support |
| GO | GO:0031080 Cellular Component | nuclear pore outer ring | 208 / 235 | 88.5% | 98.1% of 212 | ≥80% support |
| GO | GO:0034198 Biological Process | cellular response to amino acid starvation | 208 / 235 | 88.5% | 98.1% of 212 | ≥80% support |
| GO | GO:0035859 Cellular Component | Seh1-associated complex | 208 / 235 | 88.5% | 98.1% of 212 | ≥80% support |
| GO | GO:1904263 Biological Process | positive regulation of TORC1 signaling | 208 / 235 | 88.5% | 98.1% of 212 | ≥80% support |
| KEGG | K14299 | SEH1 — Membrane trafficking | 159 / 235 | 67.7% | 99.4% of 160 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB4021000.1 | CAB4021000.1 | nucleoporin seh1 isoform X2, partial [Paramuricea clavata] | Q5U4Y8 Nucleoporin SEH1 OS=Xenopus tropicalis OX=8364 GN=seh1l PE=2 | JBrowse |
| Paramuricea clavata | CAB4045588.1 | CAB4045588.1 | nucleoporin SEH1-like, partial [Paramuricea clavata] | Q6TGU2 Nucleoporin SEH1 OS=Danio rerio OX=7955 GN=seh1l PE=2 SV=2 | JBrowse |
