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This orthogroup contains 225 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 225 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10221 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 | 187 / 225 | 83.1% | 100.0% of 187 | ≥80% support |
| Pfam | PF07571 | TAF6_C — TAF6 C-terminal HEAT repeat domain | 182 / 225 | 80.9% | 98.4% of 185 | ≥80% support |
| GO | GO:0000124 Cellular Component | SAGA complex | 187 / 225 | 83.1% | 100.0% of 187 | ≥80% support |
| GO | GO:0003713 Molecular Function | transcription coactivator activity | 187 / 225 | 83.1% | 100.0% of 187 | ≥80% support |
| GO | GO:0005669 Cellular Component | transcription factor TFIID complex | 187 / 225 | 83.1% | 100.0% of 187 | ≥80% support |
| GO | GO:0006367 Biological Process | transcription initiation at RNA polymerase II promoter | 187 / 225 | 83.1% | 100.0% of 187 | ≥80% support |
| GO | GO:0016251 Molecular Function | RNA polymerase II general transcription initiation factor activity | 187 / 225 | 83.1% | 100.0% of 187 | ≥80% support |
| GO | GO:0046695 Cellular Component | SLIK (SAGA-like) complex | 187 / 225 | 83.1% | 100.0% of 187 | ≥80% support |
| GO | GO:0051123 Biological Process | RNA polymerase II preinitiation complex assembly | 187 / 225 | 83.1% | 100.0% of 187 | ≥80% support |
| Pfam | PF02969 | TAF | 163 / 225 | 72.4% | 88.1% of 185 | ≥50% support |
| GO | GO:0046982 Molecular Function | protein heterodimerization activity | 163 / 225 | 72.4% | 87.2% of 187 | ≥50% support |
| KEGG | K03131 | TAF6 — Chromosome and associated proteins | 151 / 225 | 67.1% | 100.0% of 151 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3979639.1 | CAB3979639.1 | Hypothetical predicted protein [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB3979640.1 | CAB3979640.1 | Hypothetical predicted protein [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4000555.1 | CAB4000555.1 | Transcription initiation factor TFIID subunit 6, partial [Paramuricea clavata] | P49848 Transcription initiation factor TFIID subunit 6 OS=Homo sapi | JBrowse |
| Paramuricea clavata | CAB4000556.1 | CAB4000556.1 | Transcription initiation factor TFIID subunit 6 [Paramuricea clavata] | P49848 Transcription initiation factor TFIID subunit 6 OS=Homo sapi | JBrowse |
| Paramuricea clavata | CAB4038339.1 | CAB4038339.1 | transcription initiation factor TFIID subunit 6-like [Paramuricea clavata] | Q91857 Transcription initiation factor TFIID subunit 6 OS=Xenopus l | JBrowse |
