← Back to the gene family browser
This orthogroup contains 224 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 224 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11099 | VACUOLAR SORTING PROTEIN 35 | 194 / 224 | 86.6% | 99.0% of 196 | ≥80% support |
| Pfam | PF03635 | Vps35 — Vacuolar protein sorting-associated protein 35 | 195 / 224 | 87.1% | 99.0% of 197 | ≥80% support |
| GO | GO:0015031 Biological Process | protein transport | 195 / 224 | 87.1% | 99.0% of 197 | ≥80% support |
| GO | GO:0030906 Cellular Component | retromer, cargo-selective complex | 195 / 224 | 87.1% | 99.0% of 197 | ≥80% support |
| GO | GO:0042147 Biological Process | retrograde transport, endosome to Golgi | 195 / 224 | 87.1% | 99.0% of 197 | ≥80% support |
| GO | GO:0005770 Cellular Component | late endosome | 194 / 224 | 86.6% | 98.5% of 197 | ≥80% support |
| GO | GO:0006886 Biological Process | intracellular protein transport | 194 / 224 | 86.6% | 98.5% of 197 | ≥80% support |
| GO | GO:0030904 Cellular Component | retromer complex | 194 / 224 | 86.6% | 98.5% of 197 | ≥80% support |
| KEGG | K18468 | VPS35 — Membrane trafficking | 170 / 224 | 75.9% | 98.8% of 172 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3987736.1 | CAB3987736.1 | Vacuolar sorting-associated 35 [Paramuricea clavata] | Q9EQH3 Vacuolar protein sorting-associated protein 35 OS=Mus muscul | JBrowse |
| Paramuricea clavata | CAB4013403.1 | CAB4013403.1 | vacuolar sorting-associated 35 [Paramuricea clavata] | Q2HJG5 Vacuolar protein sorting-associated protein 35 OS=Bos taurus | JBrowse |
