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Support counts the member genes carrying the term. % of genes is that count over all 220 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR21531 | LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATED | 191 / 220 | 86.8% | 100.0% of 191 | ≥80% support |
| Pfam | PF04180 | LTV — Low temperature viability protein | 187 / 220 | 85.0% | 100.0% of 187 | ≥80% support |
| GO | GO:0042274 Biological Process | ribosomal small subunit biogenesis | 192 / 220 | 87.3% | 100.0% of 192 | ≥80% support |
| GO | GO:0000056 Biological Process | ribosomal small subunit export from nucleus | 191 / 220 | 86.8% | 99.5% of 192 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 191 / 220 | 86.8% | 99.5% of 192 | ≥80% support |
| GO | GO:0005829 Cellular Component | cytosol | 191 / 220 | 86.8% | 99.5% of 192 | ≥80% support |
| GO | GO:0030688 Cellular Component | preribosome, small subunit precursor | 191 / 220 | 86.8% | 99.5% of 192 | ≥80% support |
| KEGG | K14798 | LTV1 — Ribosome biogenesis | 142 / 220 | 64.6% | 100.0% of 142 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB4034197.1 | CAB4034197.1 | Hypothetical predicted protein, partial [Paramuricea clavata] | Q6NSQ7 Protein LTV1 homolog OS=Mus musculus OX=10090 GN=Ltv1 PE=1 S | JBrowse |
| Paramuricea clavata | CAB4034198.1 | CAB4034198.1 | Hypothetical predicted protein, partial [Paramuricea clavata] | Q6NSQ7 Protein LTV1 homolog OS=Mus musculus OX=10090 GN=Ltv1 PE=1 S | JBrowse |
| Paramuricea clavata | CAB4044049.1 | CAB4044049.1 | Hypothetical predicted protein, partial [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4044050.1 | CAB4044050.1 | LTV1 homolog, partial [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4044051.1 | CAB4044051.1 | LTV1 homolog, partial [Paramuricea clavata] | – | JBrowse |
