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This orthogroup contains 217 genes from 136 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 217 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46432 | F-BOX ONLY PROTEIN 42 | 188 / 217 | 86.6% | 99.5% of 189 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 189 / 217 | 87.1% | 98.4% of 192 | ≥80% support |
| GO | GO:0019005 Cellular Component | SCF ubiquitin ligase complex | 188 / 217 | 86.6% | 97.9% of 192 | ≥80% support |
| GO | GO:1990756 Molecular Function | ubiquitin-like ligase-substrate adaptor activity | 188 / 217 | 86.6% | 97.9% of 192 | ≥80% support |
| Pfam | PF13418 | Kelch_4 — Galactose oxidase, central domain | 148 / 217 | 68.2% | 82.2% of 180 | ≥50% support |
| Pfam | PF12937 | F-box-like | 112 / 217 | 51.6% | 62.2% of 180 | ≥50% support |
| KEGG | K10317 | FBXO42 — Ubiquitin system | 121 / 217 | 55.8% | 100.0% of 121 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3979736.1 | CAB3979736.1 | F-box only 42 [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4013546.1 | CAB4013546.1 | Hypothetical predicted protein [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4027824.1 | CAB4027824.1 | F-box only 42 [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB4045194.1 | CAB4045194.1 | F-box only 42-like, partial [Paramuricea clavata] | D3ZN95 Host cell factor 1 OS=Rattus norvegicus OX=10116 GN=Hcfc1 PE | JBrowse |
