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This orthogroup contains 213 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 213 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12585 | SCC1 / RAD21 FAMILY MEMBER | 177 / 213 | 83.1% | 100.0% of 177 | ≥80% support |
| GO | GO:0003682 Molecular Function | chromatin binding | 177 / 213 | 83.1% | 100.0% of 177 | ≥80% support |
| GO | GO:0007062 Biological Process | sister chromatid cohesion | 177 / 213 | 83.1% | 100.0% of 177 | ≥80% support |
| GO | GO:0008278 Cellular Component | cohesin complex | 177 / 213 | 83.1% | 100.0% of 177 | ≥80% support |
| GO | GO:1990414 Biological Process | replication-born double-strand break repair via sister chromatid exchange | 177 / 213 | 83.1% | 100.0% of 177 | ≥80% support |
| Pfam | PF04825 | Rad21_Rec8_N — N terminus of Rad21 / Rec8 like protein | 154 / 213 | 72.3% | 88.0% of 175 | ≥50% support |
| Pfam | PF04824 | Rad21_Rec8 — Conserved region of Rad21 / Rec8 like protein | 150 / 213 | 70.4% | 85.7% of 175 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 156 / 213 | 73.2% | 88.1% of 177 | ≥50% support |
| KEGG | K06670 | SCC1, MCD1, RAD21 — Chromosome and associated proteins | 149 / 213 | 70.0% | 98.7% of 151 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3996890.1 | CAB3996890.1 | double-strand-break repair rad21 homolog [Paramuricea clavata] | O93310 Double-strand-break repair protein rad21 homolog OS=Xenopus | JBrowse |
| Paramuricea clavata | CAB3996891.1 | CAB3996891.1 | double-strand-break repair rad21 homolog [Paramuricea clavata] | O60216 Double-strand-break repair protein rad21 homolog OS=Homo sap | JBrowse |
| Paramuricea clavata | CAB3999497.1 | CAB3999497.1 | Hypothetical predicted protein [Paramuricea clavata] | – | JBrowse |
