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This orthogroup contains 209 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 209 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12096 | NUCLEAR PROTEIN SKIP-RELATED | 184 / 209 | 88.0% | 100.0% of 184 | ≥80% support |
| Pfam | PF02731 | SKIP_SNW — SKIP/SNW domain | 169 / 209 | 80.9% | 99.4% of 170 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 184 / 209 | 88.0% | 100.0% of 184 | ≥80% support |
| GO | GO:0005681 Cellular Component | spliceosomal complex | 184 / 209 | 88.0% | 100.0% of 184 | ≥80% support |
| KEGG | K06063 | SNW1, SKIIP, SKIP — Spliceosome | 159 / 209 | 76.1% | 99.4% of 160 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3989873.1 | CAB3989873.1 | puff-specific Bx42, partial [Paramuricea clavata] | Q5R7R9 SNW domain-containing protein 1 OS=Pongo abelii OX=9601 GN=S | JBrowse |
| Paramuricea clavata | CAB3989874.1 | CAB3989874.1 | SNW domain-containing 1, partial [Paramuricea clavata] | Q5R7R9 SNW domain-containing protein 1 OS=Pongo abelii OX=9601 GN=S | JBrowse |
| Paramuricea clavata | CAB3989875.1 | CAB3989875.1 | puff-specific Bx42, partial [Paramuricea clavata] | Q5R7R9 SNW domain-containing protein 1 OS=Pongo abelii OX=9601 GN=S | JBrowse |
| Paramuricea clavata | CAB4026421.1 | CAB4026421.1 | puff-specific Bx42 [Paramuricea clavata] | Q13573 SNW domain-containing protein 1 OS=Homo sapiens OX=9606 GN=S | JBrowse |
