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Support counts the member genes carrying the term. % of genes is that count over all 6,131 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 5534 / 6,131 | 90.3% | 100.0% of 5,537 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 5541 / 6,131 | 90.4% | 99.9% of 5,546 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 5489 / 6,131 | 89.5% | 99.0% of 5,546 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 5411 / 6,131 | 88.3% | 97.6% of 5,546 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 4181 / 6,131 | 68.2% | 75.4% of 5,546 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 4143 / 6,131 | 67.6% | 74.7% of 5,546 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 3711 / 6,131 | 60.5% | 66.9% of 5,546 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G158270 | XP_028394749.1 | homeobox protein ceh-1-like [Dendronephthya gigantea] | Q9BZE3 BarH-like 1 homeobox protein OS=Homo sapiens OX=9606 GN=BARH | JBrowse |
| Paragorgia papillata | Ppa0G158280 | CAB3990076.1 | barH-like 1 homeobox [Paramuricea clavata] | Q22909 Homeobox protein ceh-30 OS=Caenorhabditis elegans OX=6239 GN | JBrowse |
| Paragorgia papillata | Ppa0G158300 | CAB3990074.1 | homeobox unplugged-like [Paramuricea clavata] | P53547 Homeobox protein ceh-1 (Fragment) OS=Caenorhabditis elegans | JBrowse |
| Paragorgia papillata | Ppa0G251440 | XP_046857996.1 | homeobox protein EMX1-like isoform X1 [Xenia sp. Carnegie-2017] | Q06615 Homeobox protein notochord OS=Xenopus laevis OX=8355 GN=noto | JBrowse |
| Paragorgia papillata | Ppa0G267120 | CAB3991644.1 | Homeobox not2 [Paramuricea clavata] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Paragorgia papillata | Ppa0G267150 | CAB4024580.1 | Homeobox EMX1 [Paramuricea clavata] | Q804S6 Homeobox protein EMX1 OS=Danio rerio OX=7955 GN=emx1 PE=2 SV | JBrowse |
| Paragorgia papillata | Ppa0G268280 | XP_028415076.1 | homeobox protein MSH-D-like [Dendronephthya gigantea] | P35993 Homeobox protein XHOX-7.1' (Fragment) OS=Xenopus laevis OX=8 | JBrowse |
| Paragorgia papillata | Ppa0G268940 | CAB3976610.1 | pancreas duodenum homeobox 1 [Paramuricea clavata] | P31262 Homeobox protein Hox-C5 (Fragment) OS=Notophthalmus viridesc | JBrowse |
| Paragorgia papillata | Ppa0G291640 | XP_028404807.1 | homeobox protein MOX-2-like [Dendronephthya gigantea] | F1Q4R9 Homeobox protein MOX-1 OS=Danio rerio OX=7955 GN=meox1 PE=2 | JBrowse |
| Paragorgia papillata | Ppa0G295800 | XP_028396296.1 | homeobox protein Hmx-like [Dendronephthya gigantea] | P26797 Homeobox protein ceh-19 OS=Caenorhabditis elegans OX=6239 GN | JBrowse |
| Paragorgia papillata | Ppa0G295810 | XP_028396277.1 | homeobox protein pnx-like [Dendronephthya gigantea] | Q9BZE3 BarH-like 1 homeobox protein OS=Homo sapiens OX=9606 GN=BARH | JBrowse |
| Paragorgia papillata | Ppa0G299350 | CAB4018304.1 | homeobox -like 1, partial [Paramuricea clavata] | Q9W6D8 Homeobox protein BarH-like 1 (Fragment) OS=Gallus gallus OX= | JBrowse |
| Paragorgia papillata | Ppa0G299640 | XP_028406039.1 | homeobox protein Hox-C6-like [Dendronephthya gigantea] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Paragorgia papillata | Ppa0G300880 | XP_028406404.1 | brain-specific homeobox protein homolog [Dendronephthya gigantea] | Q9W6D8 Homeobox protein BarH-like 1 (Fragment) OS=Gallus gallus OX= | JBrowse |
| Paragorgia papillata | Ppa0G314820 | CAB4018304.1 | homeobox -like 1, partial [Paramuricea clavata] | Q9UMQ3 Homeobox protein BarH-like 2 OS=Homo sapiens OX=9606 GN=BARX | JBrowse |
| Paragorgia papillata | Ppa0G326240 | CAB3999220.1 | barH-like 1 homeobox [Paramuricea clavata] | Q75W95 NK1 transcription factor-related protein 1 OS=Danio rerio OX | JBrowse |
| Paragorgia papillata | Ppa0G378900 | CAB4018304.1 | homeobox -like 1, partial [Paramuricea clavata] | Q9UMQ3 Homeobox protein BarH-like 2 OS=Homo sapiens OX=9606 GN=BARX | JBrowse |
| Paragorgia papillata | Ppa0G387710 | CAB4016154.1 | homeobox GBX-2-like [Paramuricea clavata] | Q91907 Homeobox protein GBX-2 OS=Xenopus laevis OX=8355 GN=gbx2 PE= | JBrowse |
