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This orthogroup contains 6,125 genes from 132 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 6,125 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13710 | DNA HELICASE RECQ FAMILY MEMBER | 4587 / 6,125 | 74.9% | 99.5% of 4,608 | ≥50% support |
| GO | GO:0005694 Cellular Component | chromosome | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0006281 Biological Process | DNA repair | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0006310 Biological Process | DNA recombination | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0009378 Molecular Function | four-way junction helicase activity | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0032508 Biological Process | DNA duplex unwinding | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0043138 Molecular Function | 3'-5' DNA helicase activity | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0000724 Biological Process | double-strand break repair via homologous recombination | 4551 / 6,125 | 74.3% | 97.9% of 4,648 | ≥50% support |
| GO | GO:0006268 Biological Process | DNA unwinding involved in DNA replication | 4551 / 6,125 | 74.3% | 97.9% of 4,648 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 4430 / 6,125 | 72.3% | 95.3% of 4,648 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G000490 | CAB4016586.1 | mediator of RNA polymerase II transcription subunit 34-like [Paramuricea clavata] | P46063 ATP-dependent DNA helicase Q1 OS=Homo sapiens OX=9606 GN=REC | JBrowse |
| Paragorgia papillata | Ppa0G000500 | CAH3045346.1 | unnamed protein product [Porites lobata] | Q5UPX0 Putative ATP-dependent RNA helicase R290 OS=Acanthamoeba pol | JBrowse |
| Paragorgia papillata | Ppa0G007690 | XP_029180625.2 | probable ATP-dependent DNA helicase RecS [Acropora millepora] | P73421 ATP-dependent DNA helicase RecQ OS=Synechocystis sp. (strain | JBrowse |
| Paragorgia papillata | Ppa0G012190 | CAB4011762.1 | ATP-dependent DNA helicase -like [Paramuricea clavata] | Q9FT70 ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana | JBrowse |
| Paragorgia papillata | Ppa0G036810 | XP_015760079.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 34-like [Acropora digitifera] | Q9FT73 ATP-dependent DNA helicase Q-like 2 OS=Arabidopsis thaliana | JBrowse |
| Paragorgia papillata | Ppa0G040920 | CAB4005433.1 | mediator of RNA polymerase II transcription subunit 34-like [Paramuricea clavata] | O18017 RecQ-like DNA helicase blm-1 OS=Caenorhabditis elegans OX=62 | JBrowse |
| Paragorgia papillata | Ppa0G041500 | CAH3129035.1 | unnamed protein product, partial [Porites lobata] | P35187 ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (str | JBrowse |
| Paragorgia papillata | Ppa0G041950 | XP_028413582.1 | uncharacterized protein LOC114536425 [Dendronephthya gigantea] | P35187 ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (str | JBrowse |
| Paragorgia papillata | Ppa0G042590 | XP_015760079.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 34-like [Acropora digitifera] | Q9FT73 ATP-dependent DNA helicase Q-like 2 OS=Arabidopsis thaliana | JBrowse |
| Paragorgia papillata | Ppa0G043470 | XP_015772510.1 | PREDICTED: ATP-dependent DNA helicase RecQ-like [Acropora digitifera] | Q9FT73 ATP-dependent DNA helicase Q-like 2 OS=Arabidopsis thaliana | JBrowse |
| Paragorgia papillata | Ppa0G056570 | CAB4021813.1 | mediator of RNA polymerase II transcription subunit 34-like [Paramuricea clavata] | Q9CL21 ATP-dependent DNA helicase RecQ OS=Pasteurella multocida (st | JBrowse |
| Paragorgia papillata | Ppa0G056860 | XP_028409259.1 | putative ATP-dependent DNA helicase Q1 [Dendronephthya gigantea] | Q5UPX0 Putative ATP-dependent RNA helicase R290 OS=Acanthamoeba pol | JBrowse |
| Paragorgia papillata | Ppa0G057790 | XP_028404067.1 | Werner syndrome ATP-dependent helicase-like [Dendronephthya gigantea] | Q9FT72 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana | JBrowse |
| Paragorgia papillata | Ppa0G057820 | XP_028409259.1 | putative ATP-dependent DNA helicase Q1 [Dendronephthya gigantea] | P0CT33 ATP-dependent DNA helicase tlh1 (Fragment) OS=Schizosaccharo | JBrowse |
| Paragorgia papillata | Ppa0G058530 | CAB4021813.1 | mediator of RNA polymerase II transcription subunit 34-like [Paramuricea clavata] | P35187 ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (str | JBrowse |
| Paragorgia papillata | Ppa0G058570 | XP_028404067.1 | Werner syndrome ATP-dependent helicase-like [Dendronephthya gigantea] | Q9FT73 ATP-dependent DNA helicase Q-like 2 OS=Arabidopsis thaliana | JBrowse |
| Paragorgia papillata | Ppa0G063110 | CAB4011762.1 | ATP-dependent DNA helicase -like [Paramuricea clavata] | P71359 ATP-dependent DNA helicase RecQ OS=Haemophilus influenzae (s | JBrowse |
| Paragorgia papillata | Ppa0G063670 | XP_028413582.1 | uncharacterized protein LOC114536425 [Dendronephthya gigantea] | Q14191 Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS | JBrowse |
| Paragorgia papillata | Ppa0G064420 | XP_029182628.2 | uncharacterized protein LOC114950654 [Acropora millepora] | – | JBrowse |
| Paragorgia papillata | Ppa0G064430 | XP_044182038.1 | ATP-dependent DNA helicase RecQ-like [Acropora millepora] | Q6AYJ1 ATP-dependent DNA helicase Q1 OS=Rattus norvegicus OX=10116 | JBrowse |
