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This orthogroup contains 6,125 genes from 132 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 6,125 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13710 | DNA HELICASE RECQ FAMILY MEMBER | 4587 / 6,125 | 74.9% | 99.5% of 4,608 | ≥50% support |
| GO | GO:0005694 Cellular Component | chromosome | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0006281 Biological Process | DNA repair | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0006310 Biological Process | DNA recombination | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0009378 Molecular Function | four-way junction helicase activity | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0032508 Biological Process | DNA duplex unwinding | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0043138 Molecular Function | 3'-5' DNA helicase activity | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0000724 Biological Process | double-strand break repair via homologous recombination | 4551 / 6,125 | 74.3% | 97.9% of 4,648 | ≥50% support |
| GO | GO:0006268 Biological Process | DNA unwinding involved in DNA replication | 4551 / 6,125 | 74.3% | 97.9% of 4,648 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 4430 / 6,125 | 72.3% | 95.3% of 4,648 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G241520 | CAB3999996.1 | mediator of RNA polymerase II transcription subunit 34-like [Paramuricea clavata] | Q9FT70 ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana | JBrowse |
| Paragorgia papillata | Ppa0G243170 | CAB3999996.1 | mediator of RNA polymerase II transcription subunit 34-like [Paramuricea clavata] | Q5UPX0 Putative ATP-dependent RNA helicase R290 OS=Acanthamoeba pol | JBrowse |
| Paragorgia papillata | Ppa0G261740 | CAB4016586.1 | mediator of RNA polymerase II transcription subunit 34-like [Paramuricea clavata] | – | JBrowse |
| Paragorgia papillata | Ppa0G262770 | CAB3999996.1 | mediator of RNA polymerase II transcription subunit 34-like [Paramuricea clavata] | Q14191 Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS | JBrowse |
| Paragorgia papillata | Ppa0G273250 | CAB3994091.1 | ATP-dependent DNA helicase -like [Paramuricea clavata] | Q14191 Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS | JBrowse |
| Paragorgia papillata | Ppa0G279380 | XP_020618505.1 | LOW QUALITY PROTEIN: putative ATP-dependent DNA helicase Q1 [Orbicella faveolata] | P35187 ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (str | JBrowse |
| Paragorgia papillata | Ppa0G283120 | XP_015760079.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 34-like [Acropora digitifera] | Q9CL21 ATP-dependent DNA helicase RecQ OS=Pasteurella multocida (st | JBrowse |
| Paragorgia papillata | Ppa0G285360 | CAH3033187.1 | unnamed protein product [Porites lobata] | – | JBrowse |
| Paragorgia papillata | Ppa0G285370 | CAH3194270.1 | unnamed protein product, partial [Porites evermanni] | P50729 Probable ATP-dependent DNA helicase RecS OS=Bacillus subtili | JBrowse |
| Paragorgia papillata | Ppa0G297710 | CAH3115245.1 | unnamed protein product [Porites lobata] | O93530 Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS | JBrowse |
| Paragorgia papillata | Ppa0G319010 | XP_044170885.1 | ATP-dependent DNA helicase RecQ-like [Acropora millepora] | A8WK63 Putative ATP-dependent DNA helicase Q1 OS=Caenorhabditis bri | JBrowse |
| Paragorgia papillata | Ppa0G320640 | XP_044170885.1 | ATP-dependent DNA helicase RecQ-like [Acropora millepora] | P71359 ATP-dependent DNA helicase RecQ OS=Haemophilus influenzae (s | JBrowse |
| Paragorgia papillata | Ppa0G325410 | CAB4006179.1 | Werner syndrome ATP-dependent helicase-like [Paramuricea clavata] | O93530 Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS | JBrowse |
| Paragorgia papillata | Ppa0G328070 | XP_028404789.1 | mediator of RNA polymerase II transcription subunit 34-like [Dendronephthya gigantea] | O93530 Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS | JBrowse |
| Paragorgia papillata | Ppa0G330910 | XP_028404071.1 | Werner syndrome ATP-dependent helicase-like [Dendronephthya gigantea] | Q9VGI8 RecQ-like DNA helicase Blm OS=Drosophila melanogaster OX=722 | JBrowse |
| Paragorgia papillata | Ppa0G333180 | XP_015772510.1 | PREDICTED: ATP-dependent DNA helicase RecQ-like [Acropora digitifera] | Q5UPX0 Putative ATP-dependent RNA helicase R290 OS=Acanthamoeba pol | JBrowse |
| Paragorgia papillata | Ppa0G334790 | CAH3115245.1 | unnamed protein product [Porites lobata] | O93530 Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS | JBrowse |
| Paragorgia papillata | Ppa0G348580 | CAB3999996.1 | mediator of RNA polymerase II transcription subunit 34-like [Paramuricea clavata] | O93530 Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS | JBrowse |
| Paragorgia papillata | Ppa0G352830 | XP_044170885.1 | ATP-dependent DNA helicase RecQ-like [Acropora millepora] | A8WK63 Putative ATP-dependent DNA helicase Q1 OS=Caenorhabditis bri | JBrowse |
| Paragorgia papillata | Ppa0G353230 | XP_031557898.1 | uncharacterized protein LOC116294444 [Actinia tenebrosa] | P50729 Probable ATP-dependent DNA helicase RecS OS=Bacillus subtili | JBrowse |
