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Support counts the member genes carrying the term. % of genes is that count over all 2,575 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | HLH — Helix-loop-helix DNA-binding domain | 2335 / 2,575 | 90.7% | 99.9% of 2,337 | ≥80% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 2337 / 2,575 | 90.8% | 100.0% of 2,338 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 2321 / 2,575 | 90.1% | 99.3% of 2,338 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 2156 / 2,575 | 83.7% | 92.2% of 2,338 | ≥80% support |
| PANTHER | PTHR23349 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST | 1851 / 2,575 | 71.9% | 79.7% of 2,324 | ≥50% support |
| GO | GO:0000977 Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 1851 / 2,575 | 71.9% | 79.2% of 2,338 | ≥50% support |
| GO | GO:0032502 Biological Process | developmental process | 1851 / 2,575 | 71.9% | 79.2% of 2,338 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G132580 | XP_028397308.1 | achaete-scute complex protein T3-like [Dendronephthya gigantea] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Paragorgia papillata | Ppa0G132870 | XP_028397369.1 | achaete-scute homolog 2-like [Dendronephthya gigantea] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Paragorgia papillata | Ppa0G133070 | CAB3977675.1 | achaete-scute homolog 1-like [Paramuricea clavata] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Paragorgia papillata | Ppa0G133160 | CAB3977675.1 | achaete-scute homolog 1-like [Paramuricea clavata] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Paragorgia papillata | Ppa0G133440 | CAB3977675.1 | achaete-scute homolog 1-like [Paramuricea clavata] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Paragorgia papillata | Ppa0G134070 | CAB3977675.1 | achaete-scute homolog 1-like [Paramuricea clavata] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Paragorgia papillata | Ppa0G134140 | CAB3977675.1 | achaete-scute homolog 1-like [Paramuricea clavata] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Paragorgia papillata | Ppa0G134280 | CAB3977675.1 | achaete-scute homolog 1-like [Paramuricea clavata] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Paragorgia papillata | Ppa0G134790 | XP_028397308.1 | achaete-scute complex protein T3-like [Dendronephthya gigantea] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Paragorgia papillata | Ppa0G213550 | CAB4006605.1 | achaete-scute homolog 4-like [Paramuricea clavata] | M0QWB7 Achaete-scute homolog 5 OS=Mus musculus OX=10090 GN=Ascl5 PE | JBrowse |
| Paragorgia papillata | Ppa0G276170 | CAB3991039.1 | heart- and neural crest derivatives-expressed protein 1 [Paramuricea clavata] | P57102 Heart- and neural crest derivatives-expressed protein 2 OS=D | JBrowse |
| Paragorgia papillata | Ppa0G276190 | XP_028401698.1 | heart- and neural crest derivatives-expressed protein 1-like [Dendronephthya gigantea] | P57102 Heart- and neural crest derivatives-expressed protein 2 OS=D | JBrowse |
| Paragorgia papillata | Ppa0G276300 | KAH8394218.1 | hypothetical protein KR215_007760, partial [Drosophila sulfurigaster] | P57101 Heart- and neural crest derivatives-expressed protein 2 OS=X | JBrowse |
| Paragorgia papillata | Ppa0G302560 | CAB4030725.1 | dhand, partial, partial [Paramuricea clavata] | P57102 Heart- and neural crest derivatives-expressed protein 2 OS=D | JBrowse |
| Paragorgia papillata | Ppa0G317910 | CAB3998897.1 | neurogenic differentiation factor 1 [Paramuricea clavata] | – | JBrowse |
| Paragorgia papillata | Ppa0G351340 | CAB3981887.1 | transcription factor 15-like [Paramuricea clavata] | O13126 Transcription factor Atoh7-b OS=Xenopus laevis OX=8355 GN=at | JBrowse |
| Paragorgia papillata | Ppa0G362060 | CAB4001068.1 | achaete-scute homolog 2 [Paramuricea clavata] | Q2EGB9 Achaete-scute homolog 2 OS=Bos taurus OX=9913 GN=ASCL2 PE=2 | JBrowse |
| Paragorgia papillata | Ppa0G385050 | CAB3987095.1 | twist-related 2-like [Paramuricea clavata] | P13903 Twist-related protein OS=Xenopus laevis OX=8355 GN=twist1 PE | JBrowse |
| Paragorgia papillata | Ppa0G385070 | CAB4000062.1 | transcription factor 15-like [Paramuricea clavata] | P79782 Transcription factor 15 OS=Gallus gallus OX=9031 GN=TCF15 PE | JBrowse |
| Paragorgia papillata | Ppa0G385960 | XP_028411579.1 | pancreas transcription factor 1 subunit alpha-like [Dendronephthya gigantea] | Q7ZSX3 Pancreas transcription factor 1 subunit alpha OS=Danio rerio | JBrowse |
